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Re: [igraph] Error importing igraph in OSX 10.10.5


From: Pablo Moriano
Subject: Re: [igraph] Error importing igraph in OSX 10.10.5
Date: Wed, 14 Oct 2015 21:17:19 -0400

Hi Tamas,

I remember that just before I tried to install igraph, I typed `export 
CC=/usr/bin/gcc’ and `export CXX=/usr/bin/g++’ to declare the Apple compilers 
as my default option. Is that related with this issue? Is there any way to 
check if I have installed the C compilers (from gnu) and where? Thank you. 

> On Oct 14, 2015, at 6:30 PM, Tamas Nepusz <address@hidden> wrote:
> 
> Hi Pablo,
> 
> gcc does not seem to work on your machine. This might or might not be
> a problem - it probably doesn't affect igraph but you should try and
> reinstall the C compilers at some point to be on the safe side.
> 
> I have clang-600.0.51 on my machine and the compilation of igraph
> works perfectly fine with this version. I'll try to find another
> machine with a newer clang and test the compilation there.
> 
> T.
> 
> T.
> 
> 
> On Tue, Oct 13, 2015 at 2:46 PM, Pablo Moriano <address@hidden> wrote:
>> Hi Tamas,
>> 
>> Thank you for your response. These are the results:
>> 
>> gcc -v
>> 
>> Segmentation fault: 11
>> 
>> clang -v
>> 
>> Apple LLVM version 7.0.0 (clang-700.0.72)
>> Target: x86_64-apple-darwin14.5.0
>> Thread model: posix
>> 
>> What can be wrong?
>> 
>> On Oct 13, 2015, at 5:04 AM, Tamas Nepusz <address@hidden> wrote:
>> 
>> Hi Pablo,
>> 
>> This issue seems to be either specific to OS X 10.10.5 or to your
>> machine because it works just fine on my Mac with OS X 10.9. My best
>> guess is that this is an issue with your C compiler. Can you post the
>> output of "gcc -v" and "clang -v" here?
>> 
>> T.
>> 
>> T.
>> 
>> 
>> On Mon, Oct 12, 2015 at 11:03 PM, Pablo Moriano <address@hidden>
>> wrote:
>> 
>> Hi,
>> 
>> I installed igraph on a mac OS X10.10.5 under Anaconda Python using pip
>> install igraph-python. It seems to be installed correctly. It does not
>> complain. However, when I tried to import the library, I am getting
>> 
>> import igraph
>> 
>> Traceback (most recent call last):
>> File "<stdin>", line 1, in <module>
>> File
>> "/Users/user/anaconda/lib/python2.7/site-packages/igraph/__init__.py", line
>> 34, in <module>
>>   from igraph._igraph import *
>> ImportError:
>> dlopen(/Users/user/anaconda/lib/python2.7/site-packages/igraph/_igraph.so,
>> 2): Symbol not found: ___emutls_get_address
>> Referenced from:
>> /Users/user/anaconda/lib/python2.7/site-packages/igraph/_igraph.so
>> Expected in: dynamic lookup
>> 
>> Does anyone knows how to fix it? Thanks in advance.
>> 
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