Re: [O] Fwd: Citation in org mode does not compile

[Yagnesh Raghava Yakkala]

Hello Sanjib,

Sanjib Sikder <address@hidden> writes:

> HI,
>
> Just now I have found that now I am not even getting the pdf. I am pasting the
> error messages below.
>
> /usr/bin/texi2dvi: Processing /home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB/TestSciDocu.tex ...
> /usr/bin/texi2dvi: BIBINPUTS='.:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
> /usr/bin/texi2dvi: BSTINPUTS='.:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
> /usr/bin/texi2dvi: DVIPSHEADERS='.:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
> /usr/bin/texi2dvi: INDEXSTYLE='.:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
> /usr/bin/texi2dvi: MFINPUTS='.:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
> /usr/bin/texi2dvi: MPINPUTS='.:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
> /usr/bin/texi2dvi: TEXINPUTS='.:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
> /usr/bin/texi2dvi: TFMFONTS='.:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB:/home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB::'
> /usr/bin/texi2dvi: cd /home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB/TestSciDocu.t2d/pdf/build
> /usr/bin/texi2dvi: Cycle 1 for /home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB/TestSciDocu.tex
> /usr/bin/texi2dvi: Running rm -f TestSciDocu.tex
> /usr/bin/texi2dvi: Running ln -s /home/sanjib/Ubuntu
> One/EmacsFilesUO/OrgFilesUO/PhD_IITB/TestSciDocu.tex
> /usr/bin/texi2dvi: /usr/bin/texi2dvi: Running pdflatex --file-line-error
> </dev/null '
> onstopmode' 'This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian)
> entering extended mode
> LaTeX2e <2009/09/24>
> Babel <v3.8l> and hyphenation patterns for english, usenglishmax, dumylang,
> noh
> yphenation, loaded.
>
> (./TestSciDocu.tex (/usr/share/texmf-texlive/tex/latex/base/article.cls
> Document Class: article 2007/10/19 v1.4h Standard LaTeX document class
> (/usr/share/texmf-texlive/tex/latex/base/size11.clo))
> (/usr/share/texmf-texlive/tex/latex/base/inputenc.sty
> (/usr/share/texmf-texlive/tex/latex/base/utf8.def
> (/usr/share/texmf-texlive/tex/latex/base/t1enc.dfu)
> (/usr/share/texmf-texlive/tex/latex/base/ot1enc.dfu)
> (/usr/share/texmf-texlive/tex/latex/base/omsenc.dfu)))
> (/usr/share/texmf-texlive/tex/latex/base/fontenc.sty
> (/usr/share/texmf-texlive/tex/latex/base/t1enc.def))
> (/usr/share/texmf-texlive/tex/latex/base/fixltx2e.sty)
> (/usr/share/texmf-texlive/tex/latex/graphics/graphicx.sty
> (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty)
> (/usr/share/texmf-texlive/tex/latex/graphics/graphics.sty
> (/usr/share/texmf-texlive/tex/latex/graphics/trig.sty)
> (/etc/texmf/tex/latex/config/graphics.cfg)
> (/usr/share/texmf-texlive/tex/latex/pdftex-def/pdftex.def)))
> (/usr/share/texmf-texlive/tex/latex/tools/longtable.sty)
> (/usr/share/texmf-texlive/tex/latex/float/float.sty)
> (/usr/share/texmf-texlive/tex/latex/wrapfig/wrapfig.sty)
> (/usr/share/texmf-texlive/tex/latex/soul/soul.sty)
> (/usr/share/texmf-texlive/tex/latex/base/textcomp.sty
> (/usr/share/texmf-texlive/tex/latex/base/ts1enc.def
> (/usr/share/texmf-texlive/tex/latex/base/ts1enc.dfu)))
> (/usr/share/texmf-texlive/tex/latex/marvosym/marvosym.sty)
> (/usr/share/texmf-texlive/tex/latex/wasysym/wasysym.sty)
> (/usr/share/texmf-texlive/tex/latex/base/latexsym.sty)
> (/usr/share/texmf-texlive/tex/latex/amsfonts/amssymb.sty
> (/usr/share/texmf-texlive/tex/latex/amsfonts/amsfonts.sty))
> (/usr/share/texmf-texlive/tex/latex/hyperref/hyperref.sty
> (/usr/share/texmf-texlive/tex/generic/oberdiek/ifpdf.sty)
> (/usr/share/texmf-texlive/tex/generic/oberdiek/ifvtex.sty)
> (/usr/share/texmf-texlive/tex/generic/ifxetex/ifxetex.sty)
> (/usr/share/texmf-texlive/tex/latex/oberdiek/hycolor.sty
> (/usr/share/texmf-texlive/tex/latex/oberdiek/xcolor-patch.sty))
> (/usr/share/texmf-texlive/tex/latex/hyperref/pd1enc.def)
> (/usr/share/texmf-texlive/tex/generic/oberdiek/etexcmds.sty
> (/usr/share/texmf-texlive/tex/generic/oberdiek/infwarerr.sty))
> (/usr/share/texmf-texlive/tex/latex/latexconfig/hyperref.cfg)
> (/usr/share/texmf-texlive/tex/latex/oberdiek/kvoptions.sty
> (/usr/share/texmf-texlive/tex/generic/oberdiek/kvsetkeys.sty))
> Implicit mode ON; LaTeX internals redefined
> (/usr/share/texmf-texlive/tex/latex/ltxmisc/url.sty)
> (/usr/share/texmf-texlive/tex/generic/oberdiek/bitset.sty
> (/usr/share/texmf-texlive/tex/generic/oberdiek/intcalc.sty)
> (/usr/share/texmf-texlive/tex/generic/oberdiek/bigintcalc.sty
> (/usr/share/texmf-texlive/tex/generic/oberdiek/pdftexcmds.sty
> (/usr/share/texmf-texlive/tex/generic/oberdiek/ifluatex.sty)
> (/usr/share/texmf-texlive/tex/generic/oberdiek/ltxcmds.sty))))
> (/usr/share/texmf-texlive/tex/generic/oberdiek/atbegshi.sty))
> *hyperref using default driver hpdftex*
> (/usr/share/texmf-texlive/tex/latex/hyperref/hpdftex.def)
> (/usr/share/texmf-texlive/tex/latex/natbib/natbib.sty)
> No file TestSciDocu.aux.
> (/usr/share/texmf-texlive/tex/latex/base/ts1cmr.fd)
> (/usr/share/texmf-texlive/tex/context/base/supp-pdf.mkii
> [Loading MPS to PDF converter (version 2006.09.02).]
> ) (/usr/share/texmf-texlive/tex/latex/hyperref/nameref.sty
> (/usr/share/texmf-texlive/tex/latex/oberdiek/refcount.sty))
> (/usr/share/texmf-texlive/tex/latex/wasysym/uwasy.fd)
> (/usr/share/texmf-texlive/tex/latex/base/ulasy.fd)
> (/usr/share/texmf-texlive/tex/latex/amsfonts/umsa.fd)
> (/usr/share/texmf-texlive/tex/latex/amsfonts/umsb.fd)
>
> Package natbib Warning: Citation `biswas2008generalized' on page 1 undefined
> on
> input line 52.
>
> Package natbib Warning: Citation `cai1992length' on page 1 undefined on input
> l
> ine 53.
>
> (/usr/share/texmf-texlive/tex/latex/base/t1cmtt.fd)
>
> LaTeX Warning: Hyper reference `sec-1' on page 1 undefined on input line 76.
>
> [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}]
> No file TestSciDocu.bbl.
> [2]
>
> Package natbib Warning: There were undefined citations.
>
> (./TestSciDocu.aux)
>
> LaTeX Warning: There were undefined references.
>
> LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.
>
> )pdfTeX warning (dest): name{??} has been referenced but does not exist, repla
> ced by a fixed one
>
> </home/sanjib/.texmf-var/fonts/pk/ljfour/jknappen/ec/ectt1095.600pk> </home/sa
> njib/.texmf-var/fonts/pk/ljfour/jknappen/ec/tcrm1095.600pk>
> </home/sanjib/.texm
> f-var/fonts/pk/ljfour/jknappen/ec/ecbx1095.600pk>
> </home/sanjib/.texmf-var/font
> s/pk/ljfour/jknappen/ec/ecrm1095.600pk>
> </home/sanjib/.texmf-var/fonts/pk/ljfou
> r/jknappen/ec/ecbx1200.600pk>
> </home/sanjib/.texmf-var/fonts/pk/ljfour/jknappen
> /ec/ecbx1440.600pk>
> </home/sanjib/.texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm12
> 00.600pk>
> </home/sanjib/.texmf-var/fonts/pk/ljfour/jknappen/ec/ecrm1728.600pk><
> /usr/share/texmf-texlive/fonts/type1/public/amsfonts/cm/cmmi10.pfb></usr/share/
> texmf-texlive/fonts/type1/public/amsfonts/cm/cmr10.pfb>
> Output written on TestSciDocu.pdf (2 pages, 68665 bytes).
> Transcript written on TestSciDocu.log.
> /usr/bin/texi2dvi: 1: cd: can't cd to /home/sanjib/Ubuntu
                         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Seems problem with texi2dvi, unable to handle spaces in the path ("Ubuntu One"
has space).I haven't followed the discussion. I am not sure why you have 
texi2dvi in the
processes list. 

I set org-latex-to-pdf-process to the following whenever I want bibtex to
process the exported document.

--8<---------------cut here---------------start------------->8---
(setq org-latex-to-pdf-process 
      '("pdflatex -interaction nonstopmode %b"
        "/usr/bin/bibtex %b"
        "pdflatex -interaction nonstopmode %b"
        "pdflatex -interaction nonstopmode %b"))
--8<---------------cut here---------------end--------------->8---


Thanks.,
--
ఎందరో మహానుభావులు అందరికి వందనములు
YYR