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Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms
From: |
Dr Gregory Jefferis |
Subject: |
Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms |
Date: |
Fri, 14 Aug 2015 22:05:32 +0100 |
On 14 Aug 2015, at 20:12, Phil Cui wrote:
Yes, neither do I think that should slow down the code. However,
that's the only part that two code are different in. So, I would like
to hear from Gabor about how igraph.vs() works.
Gabor will obviously give the best response, but I have a suspicion that
this is related to what I noticed in this thread:
http://lists.nongnu.org/archive/html/igraph-help/2015-06/msg00067.html
If you follow the thread you will see that Gabor started making some
changes in response to this
https://github.com/igraph/rigraph/commit/66e2c75b16f4d7f1402581645b98ad1f9b0fcc38
which don't seem to me to be in the CRAN package. The trivial way to get
round this is to convert the igraph.vs to an integer sequence if that is
all you need.
Best,
Greg.
--
Gregory Jefferis, PhD
Division of Neurobiology
MRC Laboratory of Molecular Biology
Francis Crick Avenue
Cambridge Biomedical Campus
Cambridge, CB2 OQH, UK
http://www2.mrc-lmb.cam.ac.uk/group-leaders/h-to-m/g-jefferis
http://jefferislab.org
http://flybrain.stanford.edu
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, (continued)
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Phil Cui, 2015/08/07
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Tamas Nepusz, 2015/08/10
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Phil Cui, 2015/08/10
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Tamas Nepusz, 2015/08/11
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Phil Cui, 2015/08/11
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Tamás Nepusz, 2015/08/12
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Phil Cui, 2015/08/13
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Phil Cui, 2015/08/13
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Tamas Nepusz, 2015/08/14
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Phil Cui, 2015/08/14
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms,
Dr Gregory Jefferis <=
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Phil Cui, 2015/08/18
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Dr Gregory Jefferis, 2015/08/18
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Phil Cui, 2015/08/18
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Tamas Nepusz, 2015/08/14
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Phil Cui, 2015/08/14
- Re: [igraph] Retrieve nodes forming a motif with subgraph_isomorphisms, Tamas Nepusz, 2015/08/14