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[igraph] Problems with Pajek file format (node attributes)


From: Riccardo Tasso
Subject: [igraph] Problems with Pajek file format (node attributes)
Date: Tue, 06 Jul 2010 18:22:39 +0200
User-agent: Mozilla/5.0 (X11; U; Linux x86_64; en-US; rv:1.9.1.9) Gecko/20100423 Thunderbird/3.0.4

Dear all,
I have the following pajek file, wich I import in R with the usual g <- read.graph(filename, 'pajek'):

*vertices 3
1 98 "a"
2 11 "b"
3 38 "c d"
*arcs
1 2 3
2 1 1
3 1 8

Each node has a numeric attribute and a string attribute.
When I serialize my network with graph.write(g, filename, 'pajek'), I obtain a strange text file:

*Vertices 3
1 "98" a
2 "11" b
3 "38" c  d
*Arcs
1 2 3
2 1 1
3 1 8

The problem is that without quotes strings with spaces give a parse error reading back the last pajek written:

Error in read.graph.pajek(file, ...) :
At foreign.c:574 : Parse error in Pajek file, line 3 (syntax error), Parse error

Is there a way to resolve my problem?
Thank you,
    Riccardo



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