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01/06: gnu: Add r-enmix.


From: guix-commits
Subject: 01/06: gnu: Add r-enmix.
Date: Thu, 30 Mar 2023 08:43:03 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit e93a570fd6f2c81cca0dbbbe3faf36e8f5afffe2
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Mar 30 14:29:33 2023 +0200

    gnu: Add r-enmix.
    
    * gnu/packages/bioconductor.scm (r-enmix): New variable.
---
 gnu/packages/bioconductor.scm | 42 ++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 42 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 5a59ab86eb..a224eecd70 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6454,6 +6454,48 @@ other types of genomic data that produce counts, 
including ChIP-seq, SAGE and
 CAGE.")
     (license license:gpl2+)))
 
+(define-public r-enmix
+  (package
+    (name "r-enmix")
+    (version "1.34.02")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "ENmix" version))
+              (sha256
+               (base32
+                "0rn541xfsxfdyzy3dn727bwrfpkgp12282lax7xg1j8584mk4pcf"))))
+    (properties `((upstream-name . "ENmix")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-annotationhub
+           r-biobase
+           r-doparallel
+           r-dynamictreecut
+           r-experimenthub
+           r-foreach
+           r-genefilter
+           r-geneplotter
+           r-gplots
+           r-gtools
+           r-illuminaio
+           r-impute
+           r-iranges
+           r-matrixstats
+           r-minfi
+           r-preprocesscore
+           r-quadprog
+           r-rpmm
+           r-s4vectors
+           r-summarizedexperiment))
+    (native-inputs (list r-knitr))
+    (home-page 
"https://bioconductor.org/packages/release/bioc/html/ENmix.html";)
+    (synopsis
+     "Quality control and analysis tools for Illumina DNA methylation 
BeadChip")
+    (description
+     "This package provides tools for quality control, analysis and
+visualization of Illumina DNA methylation array data.")
+    (license license:artistic2.0)))
+
 (define-public r-ensembldb
   (package
     (name "r-ensembldb")



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