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04/06: gnu: Add r-shinymethyl.
From: |
guix-commits |
Subject: |
04/06: gnu: Add r-shinymethyl. |
Date: |
Thu, 30 Mar 2023 08:43:04 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 928e9aa236e665572a3564a4da76358d5700dbab
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Mar 30 14:35:50 2023 +0200
gnu: Add r-shinymethyl.
* gnu/packages/bioconductor.scm (r-shinymethyl): New variable.
---
gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index e01af8f7e5..b7d4324bbf 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8800,6 +8800,33 @@ sequence motif occurrences across a large set of
sequences centred at a common
reference point and sorted by a user defined feature.")
(license license:gpl3+)))
+(define-public r-shinymethyl
+ (package
+ (name "r-shinymethyl")
+ (version "1.34.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "shinyMethyl" version))
+ (sha256
+ (base32
+ "1xbadc4xszcqh211r8z0wp417f17aczz834icli17mcsl996ln3a"))))
+ (properties `((upstream-name . "shinyMethyl")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocgenerics
+ r-illuminahumanmethylation450kmanifest
+ r-matrixstats
+ r-minfi
+ r-rcolorbrewer
+ r-shiny))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/shinyMethyl")
+ (synopsis "Interactive visualization for Illumina methylation arrays")
+ (description
+ "This package provides an interactive tool for visualizing Illumina
+methylation array data. Both the 450k and EPIC array are supported.")
+ (license license:artistic2.0)))
+
(define-public r-shortread
(package
(name "r-shortread")
- branch master updated (96e81b18b9 -> caf163536a), guix-commits, 2023/03/30
- 02/06: gnu: Add r-flowsorted-blood-450k., guix-commits, 2023/03/30
- 05/06: gnu: Add r-illuminahumanmethylationepicanno-ilm10b5-hg38., guix-commits, 2023/03/30
- 06/06: gnu: Add r-maxprobes., guix-commits, 2023/03/30
- 04/06: gnu: Add r-shinymethyl.,
guix-commits <=
- 01/06: gnu: Add r-enmix., guix-commits, 2023/03/30
- 03/06: gnu: Add r-flowsorted-blood-epic., guix-commits, 2023/03/30