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02/06: gnu: Add r-flowsorted-blood-450k.
From: |
guix-commits |
Subject: |
02/06: gnu: Add r-flowsorted-blood-450k. |
Date: |
Thu, 30 Mar 2023 08:43:03 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 0024e4e6d4249c4163bd58ee6b208b7e3bfeb341
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Mar 30 14:33:59 2023 +0200
gnu: Add r-flowsorted-blood-450k.
* gnu/packages/bioconductor.scm (r-flowsorted-blood-450k): New variable.
---
gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
1 file changed, 23 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index a224eecd70..3d6a545ff8 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1498,6 +1498,29 @@ display copy number variation. Files are stored as
GRanges objects from the
GenomicRanges Bioconductor package.")
(license license:gpl2)))
+(define-public r-flowsorted-blood-450k
+ (package
+ (name "r-flowsorted-blood-450k")
+ (version "1.36.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "FlowSorted.Blood.450k"
+ version 'experiment))
+ (sha256
+ (base32
+ "1ha9qsp5g3g2yhnk574x6xhg95bb29ywvmg3ns1c50z69v6wbraq"))))
+ (properties `((upstream-name . "FlowSorted.Blood.450k")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-minfi))
+ (home-page "https://bioconductor.org/packages/FlowSorted.Blood.450k")
+ (synopsis
+ "Illumina HumanMethylation data on sorted blood cell populations")
+ (description
+ "This package provides raw data objects for the Illumina 450k DNA
+methylation microarrays, and an object depicting which CpGs on the array are
+associated with cell type.")
+ (license license:artistic2.0)))
+
(define-public r-genelendatabase
(package
(name "r-genelendatabase")
- branch master updated (96e81b18b9 -> caf163536a), guix-commits, 2023/03/30
- 02/06: gnu: Add r-flowsorted-blood-450k.,
guix-commits <=
- 05/06: gnu: Add r-illuminahumanmethylationepicanno-ilm10b5-hg38., guix-commits, 2023/03/30
- 06/06: gnu: Add r-maxprobes., guix-commits, 2023/03/30
- 04/06: gnu: Add r-shinymethyl., guix-commits, 2023/03/30
- 01/06: gnu: Add r-enmix., guix-commits, 2023/03/30
- 03/06: gnu: Add r-flowsorted-blood-epic., guix-commits, 2023/03/30