04/10: gnu: Add r-flowcore.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit a6fedf1f37dd031829caae0b743016cd5d52f06c
Author: zimoun <address@hidden>
Date:   Wed Jul 24 20:21:57 2019 +0200

    gnu: Add r-flowcore.
    
    * gnu/packages/bioconductor.scm (r-flowcore): New variable.
    
    Signed-off-by: Ricardo Wurmus <address@hidden>
---
 gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++
 1 file changed, 30 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 649b64a..93dec5b 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4797,3 +4797,33 @@ read mapping, read counting, SNP calling, structural 
variant detection and
 gene fusion discovery.  It can be applied to all major sequencing techologies
 and to both short and long sequence reads.")
     (license license:gpl3)))
+
+(define-public r-flowcore
+  (package
+    (name "r-flowcore")
+    (version "1.50.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "flowCore" version))
+       (sha256
+        (base32
+         "0pvcyzycsmgc8iw60q9xnhllfan6ihwpz3gvk8h1n9jmhpxzylan"))))
+    (properties `((upstream-name . "flowCore")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-bh" ,r-bh)
+       ("r-biobase" ,r-biobase)
+       ("r-biocgenerics" ,r-biocgenerics)
+       ("r-corpcor" ,r-corpcor)
+       ("r-graph" ,r-graph)
+       ("r-mass" ,r-mass)
+       ("r-matrixstats" ,r-matrixstats)
+       ("r-rcpp" ,r-rcpp)
+       ("r-rrcov" ,r-rrcov)))
+    (home-page "https://bioconductor.org/packages/flowCore";)
+    (synopsis "Basic structures for flow cytometry data")
+    (description
+     "This package provides S4 data structures and basic functions to deal
+with flow cytometry data.")
+    (license license:artistic2.0)))