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02/14: gnu: Add r-rbowtie.
From: |
guix-commits |
Subject: |
02/14: gnu: Add r-rbowtie. |
Date: |
Fri, 10 May 2019 07:34:34 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 4d06ef4b716f3023e6907c6abdc41c02d524a16b
Author: Ricardo Wurmus <address@hidden>
Date: Fri May 10 12:47:18 2019 +0200
gnu: Add r-rbowtie.
* gnu/packages/bioconductor.scm (r-rbowtie): New variable.
---
gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
1 file changed, 23 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index ab9f3e9..c594621 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4369,3 +4369,26 @@ number states are realizations of Multinomial random
variables; counts are
modeled as Poisson random processes; and continuous measures are modeled by
Gaussian distributions.")
(license license:gpl2+)))
+
+(define-public r-rbowtie
+ (package
+ (name "r-rbowtie")
+ (version "1.24.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "Rbowtie" version))
+ (sha256
+ (base32
+ "1p8gbd2zn677lq8d009p2cplg1jm2jhn81lppipj638i9ynjh44f"))))
+ (properties `((upstream-name . "Rbowtie")))
+ (build-system r-build-system)
+ (inputs
+ `(("zlib" ,zlib)))
+ (home-page "https://bioconductor.org/packages/Rbowtie/")
+ (synopsis "R bowtie wrapper")
+ (description
+ "This package provides an R wrapper around the popular bowtie short read
+aligner and around SpliceMap, a de novo splice junction discovery and
+alignment tool.")
+ (license license:artistic2.0)))
- branch master updated (b40a36b -> d13f3a0), guix-commits, 2019/05/10
- 01/14: gnu: Add r-iclusterplus., guix-commits, 2019/05/10
- 02/14: gnu: Add r-rbowtie.,
guix-commits <=
- 12/14: gnu: Add r-quasr., guix-commits, 2019/05/10
- 05/14: gnu: Add r-plot3d., guix-commits, 2019/05/10
- 07/14: gnu: Add r-refmanager., guix-commits, 2019/05/10
- 13/14: gnu: Add r-rqc., guix-commits, 2019/05/10
- 06/14: gnu: Add r-ggfortify., guix-commits, 2019/05/10
- 11/14: gnu: Add r-rhisat2., guix-commits, 2019/05/10
- 03/14: gnu: Add r-dalex., guix-commits, 2019/05/10
- 09/14: gnu: Add r-xgboost., guix-commits, 2019/05/10
- 14/14: gnu: gnome-tweak-tool: Update to 3.28.1., guix-commits, 2019/05/10
- 04/14: gnu: Add r-enrichr., guix-commits, 2019/05/10