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[igraph] Between-class network statistics
From: |
Scott Chui |
Subject: |
[igraph] Between-class network statistics |
Date: |
Tue, 18 Feb 2020 19:06:12 +0800 |
Hello,
I am using igraph version 1.2.4.2 in R 3.5.2 on macOS 10.13 to analyse network
data. The vertices have categorical attributes like “Sex” and “Age_class”,
while the edges are undirected and weighted. I imported the adjacency matrix
and attached the vertex attributes using the “set_vertex_attr” command. I would
like to calculate network metrics such as betweenness and strength not only of
the global network, but also between and within the attribute classes, i.e. to
calculate betweenness of the weighted connection between female—female or
male—female.
I am able to calculated the within-class network statistics by removing
vertices of other attribute class, e.g.
>gM <- delete.vertices(g, V(g)[Sex != "M”]) ## network of only males
>betweenness(gM, direction = F) ## betweenness of M—M
However, this method does not work on between-class statistics, I would like to
know how can I calculate between-class statistics in igraph, thank you.
Best,
Scott
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