Re: [igraph] how to plot degree distribution, please?

[Tamas Nepusz]

You have imported plot() from Matplotlib, not from igraph. You need to
import igraph's plot() function:

>>> from igraph import plot
>>> plot(dd).show()

T.


On Sun, Sep 18, 2016 at 10:15 AM, 四正（红砖） <address@hidden> wrote:
>
> Thank you for your reply, Tamas. But when I use plot(dd), I got a type
> error:
>
> BTW, i'm using python 3.5.1
>
> ---------------------------------------------------------------------------
> TypeError                                 Traceback (most recent call last)
> <ipython-input-6-40f2a8de40be> in <module>()
>       1 dd = g.degree_distribution()
> ----> 2 plot(dd).show()
>
> /usr/local/lib/python3.5/site-packages/matplotlib/pyplot.py in plot(*args,
> **kwargs)
>    3152         ax.hold(hold)
>    3153     try:
> -> 3154         ret = ax.plot(*args, **kwargs)
>    3155     finally:
>    3156         ax.hold(washold)
>
> /usr/local/lib/python3.5/site-packages/matplotlib/__init__.py in inner(ax,
> *args, **kwargs)
>    1809                     warnings.warn(msg % (label_namer,
> func.__name__),
>    1810                                   RuntimeWarning, stacklevel=2)
> -> 1811             return func(ax, *args, **kwargs)
>    1812         pre_doc = inner.__doc__
>    1813         if pre_doc is None:
>
> /usr/local/lib/python3.5/site-packages/matplotlib/axes/_axes.py in
> plot(self, *args, **kwargs)
>    1426
>    1427         for line in self._get_lines(*args, **kwargs):
> -> 1428             self.add_line(line)
>    1429             lines.append(line)
>    1430
>
> /usr/local/lib/python3.5/site-packages/matplotlib/axes/_base.py in
> add_line(self, line)
>    1697             line.set_clip_path(self.patch)
>    1698
> -> 1699         self._update_line_limits(line)
>    1700         if not line.get_label():
>    1701             line.set_label('_line%d' % len(self.lines))
>
> /usr/local/lib/python3.5/site-packages/matplotlib/axes/_base.py in
> _update_line_limits(self, line)
>    1708         Figures out the data limit of the given line, updating
> self.dataLim.
>    1709         """
> -> 1710         path = line.get_path()
>    1711         if path.vertices.size == 0:
>    1712             return
>
> /usr/local/lib/python3.5/site-packages/matplotlib/lines.py in get_path(self)
>     924         """
>     925         if self._invalidy or self._invalidx:
> --> 926             self.recache()
>     927         return self._path
>     928
>
> /usr/local/lib/python3.5/site-packages/matplotlib/lines.py in recache(self,
> always)
>     618                 y = ma.asarray(yconv, np.float_).filled(np.nan)
>     619             else:
> --> 620                 y = np.asarray(yconv, np.float_)
>     621             y = y.ravel()
>     622         else:
>
> /usr/local/lib/python3.5/site-packages/numpy/core/numeric.py in asarray(a,
> dtype, order)
>     472
>     473     """
> --> 474     return array(a, dtype, copy=False, order=order)
>     475
>     476 def asanyarray(a, dtype=None, order=None):
>
> TypeError: float() argument must be a string or a number, not 'Histogram'
>
>
> ------------------ Original ------------------
> From:  "Tamas Nepusz";<address@hidden>;
> Date:  Sun, Sep 18, 2016 03:45 AM
> To:  "Help for igraph users"<address@hidden>;
> Subject:  Re: [igraph] how to plot degree distribution, please?
>
>> dd = g.degree_distribution()
>> dd.__plot__("dd",(800,800),None)
>
> __plot__ is an internal function; you are not supposed to call it
> directly. Call the plot() function instead:
>
>>>> dd = g.degree_distribution()
>>>> plot(dd)
>
> or, if the plot is not shown automatically, then:
>
>>>> plot(dd).show()
>
> T.
>
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