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Re: [igraph] how to plot degree distribution, please?


From: ????????????
Subject: Re: [igraph] how to plot degree distribution, please?
Date: Sun, 18 Sep 2016 16:15:39 +0800


Thank you for your reply, Tamas. But when I use plot(dd), I got a type error:

BTW, i'm using python 3.5.1

---------------------------------------------------------------------------
TypeError                                 Traceback (most recent call last)
<ipython-input-6-40f2a8de40be> in <module>()
      1 dd = g.degree_distribution()
----> 2 plot(dd).show()

/usr/local/lib/python3.5/site-packages/matplotlib/pyplot.py in plot(*args, **kwargs)
   3152         ax.hold(hold)
   3153     try:
-> 3154         ret = ax.plot(*args, **kwargs)
   3155     finally:
   3156         ax.hold(washold)

/usr/local/lib/python3.5/site-packages/matplotlib/__init__.py in inner(ax, *args, **kwargs)
   1809                     warnings.warn(msg % (label_namer, func.__name__),
   1810                                   RuntimeWarning, stacklevel=2)
-> 1811             return func(ax, *args, **kwargs)
   1812         pre_doc = inner.__doc__
   1813         if pre_doc is None:

/usr/local/lib/python3.5/site-packages/matplotlib/axes/_axes.py in plot(self, *args, **kwargs)
   1426 
   1427         for line in self._get_lines(*args, **kwargs):
-> 1428             self.add_line(line)
   1429             lines.append(line)
   1430 

/usr/local/lib/python3.5/site-packages/matplotlib/axes/_base.py in add_line(self, line)
   1697             line.set_clip_path(self.patch)
   1698 
-> 1699         self._update_line_limits(line)
   1700         if not line.get_label():
   1701             line.set_label('_line%d' % len(self.lines))

/usr/local/lib/python3.5/site-packages/matplotlib/axes/_base.py in _update_line_limits(self, line)
   1708         Figures out the data limit of the given line, updating self.dataLim.
   1709         """
-> 1710         path = line.get_path()
   1711         if path.vertices.size == 0:
   1712             return

/usr/local/lib/python3.5/site-packages/matplotlib/lines.py in get_path(self)
    924         """
    925         if self._invalidy or self._invalidx:
--> 926             self.recache()
    927         return self._path
    928 

/usr/local/lib/python3.5/site-packages/matplotlib/lines.py in recache(self, always)
    618                 y = ma.asarray(yconv, np.float_).filled(np.nan)
    619             else:
--> 620                 y = np.asarray(yconv, np.float_)
    621             y = y.ravel()
    622         else:

/usr/local/lib/python3.5/site-packages/numpy/core/numeric.py in asarray(a, dtype, order)
    472 
    473     """
--> 474     return array(a, dtype, copy=False, order=order)
    475 
    476 def asanyarray(a, dtype=None, order=None):

TypeError: float() argument must be a string or a number, not 'Histogram'

------------------ Original ------------------
From:  "Tamas Nepusz";<address@hidden>;
Date:  Sun, Sep 18, 2016 03:45 AM
To:  "Help for igraph users"<address@hidden>;
Subject:  Re: [igraph] how to plot degree distribution, please?

> dd = g.degree_distribution()
> dd.__plot__("dd",(800,800),None)

__plot__ is an internal function; you are not supposed to call it
directly. Call the plot() function instead:

>>> dd = g.degree_distribution()
>>> plot(dd)

or, if the plot is not shown automatically, then:

>>> plot(dd).show()

T.

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