08/09: gnu: Add r-hgnchelper.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 03ef0914d5cb561ab1e0091c88457e6538b0231f
Author: Navid Afkhami <navid.afkhami@mdc-berlin.de>
AuthorDate: Fri Mar 3 13:07:22 2023 +0000

    gnu: Add r-hgnchelper.
    
    * gnu/packages/cran.scm (r-hgnchelper): New variable.
---
 gnu/packages/cran.scm | 24 ++++++++++++++++++++++++
 1 file changed, 24 insertions(+)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 16314b33d7..8f058c5906 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -3052,6 +3052,30 @@ model fitting and error handling.")
 into a pipeline of data manipulation and visualisation.")
     (license license:gpl3)))
 
+(define-public r-hgnchelper
+  (package
+    (name "r-hgnchelper")
+    (version "0.8.1")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "HGNChelper" version))
+              (sha256
+               (base32
+                "0qwkk5658j4j6w2wgvxkp38cyvscjp93d3zc7gb97vcihqx0ngxa"))))
+    (properties `((upstream-name . "HGNChelper")))
+    (build-system r-build-system)
+    (native-inputs (list r-knitr))
+    (home-page "https://github.com/waldronlab/HGNChelper";)
+    (synopsis
+     "Identification and correction of invalid gene symbols for human and 
mouse")
+    (description
+     "This package provides a set of R functions for identifying and
+correcting HGNC human gene symbols.  In addition, you can identify MGI mouse
+gene symbols, which have been converted to date format by Excel, withdrawn, or
+aliased.  It also contains functions for reversibly converting between HGNC
+symbols and valid R names.")
+    (license license:gpl2+)))
+
 (define-public r-hmm
   (package
     (name "r-hmm")