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06/08: gnu: Add r-dendsort.
From: |
guix-commits |
Subject: |
06/08: gnu: Add r-dendsort. |
Date: |
Wed, 1 Mar 2023 07:47:16 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit c7a25ee3de555f78b4726d9dc0693104ade32c92
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Mon Feb 27 11:28:44 2023 +0100
gnu: Add r-dendsort.
* gnu/packages/cran.scm (r-dendsort): New variable.
---
gnu/packages/cran.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 91a4797c43..d4acc8cfdc 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -5333,6 +5333,33 @@ compare different dendrograms to one another.")
;; Any of these versions
(license (list license:gpl2 license:gpl3))))
+(define-public r-dendsort
+ (package
+ (name "r-dendsort")
+ (version "0.3.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "dendsort" version))
+ (sha256
+ (base32 "0rs7y471wrhkgibxdmfh5xhp3pa004rrlm2w08b6qli5gq4im5d2"))))
+ (properties `((upstream-name . "dendsort")))
+ (build-system r-build-system)
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/evanbiederstedt/dendsort")
+ (synopsis "Modular leaf ordering methods for dendrogram nodes")
+ (description
+ "This package represents an implementation of functions to optimize
+ordering of nodes in a dendrogram, without affecting the meaning of the
+dendrogram. A dendrogram can be sorted based on the average distance of
+subtrees, or based on the smallest distance value. These sorting methods
+improve readability and interpretability of tree structure, especially for
+tasks such as comparison of different distance measures or linkage types and
+identification of tight clusters and outliers. As a result, it also
+introduces more meaningful reordering for a coupled heatmap visualization.")
+ ;; Any of these versions
+ (license (list license:gpl2 license:gpl3))))
+
(define-public r-getoptlong
(package
(name "r-getoptlong")
- branch master updated (2eb750ab1f -> 1fb43d1d19), guix-commits, 2023/03/01
- 02/08: gnu: Add r-n2r., guix-commits, 2023/03/01
- 06/08: gnu: Add r-dendsort.,
guix-commits <=
- 01/08: gnu: Add r-rcppspdlog., guix-commits, 2023/03/01
- 05/08: gnu: Add r-drat., guix-commits, 2023/03/01
- 07/08: gnu: Add r-pagoda2., guix-commits, 2023/03/01
- 03/08: gnu: Add r-sccore., guix-commits, 2023/03/01
- 04/08: gnu: Add r-leidenalg., guix-commits, 2023/03/01
- 08/08: gnu: Add r-conos., guix-commits, 2023/03/01