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06/09: gnu: blasr-libcpp: Update to 5.3.5.
From: |
guix-commits |
Subject: |
06/09: gnu: blasr-libcpp: Update to 5.3.5. |
Date: |
Tue, 7 Dec 2021 17:52:14 -0500 (EST) |
rekado pushed a commit to branch core-updates-frozen
in repository guix.
commit d068de0c7d6681016bbc8184f8b7ace77e7301d0
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Dec 7 23:19:21 2021 +0100
gnu: blasr-libcpp: Update to 5.3.5.
* gnu/packages/bioinformatics.scm (blasr-libcpp): Update to 5.3.5.
[inputs]: Add htslib.
---
gnu/packages/bioinformatics.scm | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index ee902c0..e960772 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -696,7 +696,7 @@ speedup comes during compression.")
(define-public blasr-libcpp
(package
(name "blasr-libcpp")
- (version "5.3.3")
+ (version "5.3.5")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -705,7 +705,7 @@ speedup comes during compression.")
(file-name (git-file-name name version))
(sha256
(base32
- "0cn5l42zyq67sj0g2imqkhayz2iqvv0a1pgpbmlq0qynjmsrbfd2"))))
+ "07cdfnfl29zf2j7fpaaqaxghq3p0wnc109razs0icwm2q6l3gycb"))))
(build-system meson-build-system)
(arguments
`(#:phases
@@ -742,6 +742,7 @@ libblasr_gtest_dep = cpp.find_library('gtest_main', dirs :
'~a')\n"
(inputs
`(("boost" ,boost)
("hdf5" ,hdf5)
+ ("htslib" ,htslib)
("pbbam" ,pbbam)
("zlib" ,zlib)))
(native-inputs
- branch core-updates-frozen updated (8dcf062 -> 5fb1ba8), guix-commits, 2021/12/07
- 01/09: gnu: Add pbcopper., guix-commits, 2021/12/07
- 03/09: gnu: pbbam: Update to 1.7.0., guix-commits, 2021/12/07
- 08/09: gnu: blasr: Update to 5.3.5., guix-commits, 2021/12/07
- 02/09: gnu: bwa-pssm: Fix build., guix-commits, 2021/12/07
- 04/09: gnu: clipper: Update to 2.0.1., guix-commits, 2021/12/07
- 05/09: gnu: htseq: Update to 0.12.3., guix-commits, 2021/12/07
- 06/09: gnu: blasr-libcpp: Update to 5.3.5.,
guix-commits <=
- 07/09: gnu: blasr: Remove trailing #T., guix-commits, 2021/12/07
- 09/09: gnu: newick-utils: Pass -fcommon to compiler., guix-commits, 2021/12/07