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01/21: gnu: Add r-nbpseq.
From: |
guix-commits |
Subject: |
01/21: gnu: Add r-nbpseq. |
Date: |
Wed, 13 Mar 2019 08:18:10 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 7ed869f7962a07473af7f3e6671cda2f87792b77
Author: Ricardo Wurmus <address@hidden>
Date: Wed Mar 13 09:08:22 2019 +0100
gnu: Add r-nbpseq.
* gnu/packages/bioconductor.scm (r-nbpseq): New variable.
---
gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 4fc7fcb..7127e96 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1789,3 +1789,27 @@ Distance Summary), which selects differentially
expressed genes by integrating
and summarizing a set of statistics using a weighted distance approach.")
;; Any version of the LGPL.
(license license:lgpl3+)))
+
+;; This is a CRAN package, but since it depends on a Bioconductor package we
+;; put it here.
+(define-public r-nbpseq
+ (package
+ (name "r-nbpseq")
+ (version "0.3.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "NBPSeq" version))
+ (sha256
+ (base32
+ "0l4ylxhs2k9ww21jjqs67fygk92avdchhx2y1ixzl7yr2yh1y9by"))))
+ (properties `((upstream-name . "NBPSeq")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-qvalue" ,r-qvalue)))
+ (home-page "https://cran.r-project.org/web/packages/NBPSeq")
+ (synopsis "Negative binomial models for RNA-Seq data")
+ (description
+ "This package provides negative binomial models for two-group comparisons
+and regression inferences from RNA-sequencing data.")
+ (license license:gpl2)))
- branch master updated (2b6ab17 -> 0fbaf19), guix-commits, 2019/03/13
- 06/21: gnu: Add r-shinyjs., guix-commits, 2019/03/13
- 01/21: gnu: Add r-nbpseq.,
guix-commits <=
- 02/21: gnu: Add r-ebseq., guix-commits, 2019/03/13
- 11/21: gnu: Add r-icobra., guix-commits, 2019/03/13
- 12/21: gnu: Add r-mast., guix-commits, 2019/03/13
- 05/21: gnu: Add r-shinybs., guix-commits, 2019/03/13
- 20/21: gnu: Add r-bumphunter., guix-commits, 2019/03/13
- 09/21: gnu: Add r-nor1mix., guix-commits, 2019/03/13
- 07/21: gnu: Add r-colourpicker., guix-commits, 2019/03/13
- 04/21: gnu: Add r-ihw., guix-commits, 2019/03/13
- 08/21: gnu: Add r-ggextra., guix-commits, 2019/03/13
- 10/21: gnu: Add r-beanplot., guix-commits, 2019/03/13