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Bug: R src blocks fail to produce link to graphics file [9.3 org-plus-co
From: |
Tyler Smith |
Subject: |
Bug: R src blocks fail to produce link to graphics file [9.3 org-plus-contrib-20200127] |
Date: |
Mon, 27 Jan 2020 11:13:20 -0500 |
User-agent: |
Cyrus-JMAP/3.1.7-777-gdb93371-fmstable-20200123v1 |
To reproduce:
1. Start from `emacs -Q`
2. open the following org file:
```
#+BEGIN_SRC elisp setup
(require 'package)
(setq package-load-list
'((org-plus-contrib t)
(ess t)
(julia-mode t)))
(package-initialize)
(require 'org)
(require 'ess)
(org-babel-do-load-languages
'org-babel-load-languages
'((emacs-lisp . t)
(R . t)
(shell . t)))
#+END_SRC
#+RESULTS:
#+begin_src R :results graphics :file test.jpg
plot (1:10)
#+end_src
```
3. Evaluate the first code block (C-c C-c) to load ess and setup babel to
evaluate R code blocks
4. Evaluate the second code block.
What I expect:
A `#+RESULTS:` block is inserted, with a link to the file test.jpg;
What happens instead:
A message appears in the minibuffer: 'Code block produced no output'.
This worked previously. I'm not sure when it broke - sometime in the last two
months I think, as I demoed this feature for colleagues in November.
Emacs state provided below.
Best,
Tyler
Emacs : GNU Emacs 28.0.50 (build 2, x86_64-pc-linux-gnu, GTK+ Version 3.22.30)
of 2020-01-02
Package: Org mode version 9.3 (release_9.3 @
/home/smithty/.emacs.d/elpa/org-plus-contrib-20200127/)
current state:
==============
(setq
org-src-mode-hook '(org-src-babel-configure-edit-buffer
org-src-mode-configure-edit-buffer)
org-link-shell-confirm-function 'yes-or-no-p
org-metadown-hook '(org-babel-pop-to-session-maybe)
org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
org-mode-hook '(org-eldoc-load
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook org-show-all append local]
5]
#[0 "\300\301\302\303\304$\207"
[add-hook change-major-mode-hook org-babel-show-result-all
append local] 5]
org-babel-result-hide-spec org-babel-hide-all-hashes)
org-archive-hook '(org-attach-archive-delete-maybe)
org-confirm-elisp-link-function 'yes-or-no-p
org-agenda-before-write-hook '(org-agenda-add-entry-text)
org-metaup-hook '(org-babel-load-in-session-maybe)
org-bibtex-headline-format-function #[257 "\300\236A\207" [:title] 3 "\n\n(fn
ENTRY)"]
org-babel-pre-tangle-hook '(save-buffer)
org-tab-first-hook '(org-babel-hide-result-toggle-maybe
org-babel-header-arg-expand)
org-babel-load-languages '((emacs-lisp . t) (R . t) (shell . t))
org-src-lang-modes '(("redis" . redis) ("php" . php) ("arduino" . arduino)
("C" . c) ("C++" . c++)
("asymptote" . asy) ("bash" . sh) ("beamer" . latex)
("calc" . fundamental)
("cpp" . c++) ("ditaa" . artist) ("dot" . fundamental)
("elisp" . emacs-lisp)
("ocaml" . tuareg) ("screen" . shell-script) ("shell" .
sh) ("sqlite" . sql))
org-occur-hook '(org-first-headline-recenter)
org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-show-empty-lines
org-optimize-window-after-visibility-change)
org-speed-command-hook '(org-speed-command-activate
org-babel-speed-command-activate)
org-confirm-shell-link-function 'yes-or-no-p
org-link-parameters '(("attachment" :follow org-attach-open-link :export
org-attach-export-link
:complete org-attach-complete-link)
("id" :follow org-id-open) ("eww" :follow eww :store
org-eww-store-link)
("rmail" :follow org-rmail-open :store
org-rmail-store-link)
("mhe" :follow org-mhe-open :store org-mhe-store-link)
("irc" :follow org-irc-visit :store org-irc-store-link
:export org-irc-export)
("info" :follow org-info-open :export org-info-export
:store
org-info-store-link)
("gnus" :follow org-gnus-open :store org-gnus-store-link)
("docview" :follow org-docview-open :export
org-docview-export :store
org-docview-store-link)
("bibtex" :follow org-bibtex-open :store
org-bibtex-store-link)
("bbdb" :follow org-bbdb-open :export org-bbdb-export
:complete
org-bbdb-complete-link :store org-bbdb-store-link)
("w3m" :store org-w3m-store-link) ("file+sys")
("file+emacs")
("shell" :follow org-link--open-shell)
("news" :follow
#[257 "\301\300\302Q!\207" ["news" browse-url ":"] 5
"\n\n(fn URL)"])
("mailto" :follow
#[257 "\301\300\302Q!\207" ["mailto" browse-url ":"] 5
"\n\n(fn URL)"])
("https" :follow
#[257 "\301\300\302Q!\207" ["https" browse-url ":"] 5
"\n\n(fn URL)"])
("http" :follow
#[257 "\301\300\302Q!\207" ["http" browse-url ":"] 5
"\n\n(fn URL)"])
("ftp" :follow
#[257 "\301\300\302Q!\207" ["ftp" browse-url ":"] 5
"\n\n(fn URL)"])
("help" :follow org-link--open-help)
("file" :complete org-link-complete-file)
("elisp" :follow org-link--open-elisp) ("doi" :follow
org-link--open-doi))
org-link-elisp-confirm-function 'yes-or-no-p
)
--
plantarum.ca
- Bug: R src blocks fail to produce link to graphics file [9.3 org-plus-contrib-20200127],
Tyler Smith <=