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10/14: gnu: sortmerna: Fetch sources from git.
From: |
Ricardo Wurmus |
Subject: |
10/14: gnu: sortmerna: Fetch sources from git. |
Date: |
Wed, 7 Nov 2018 17:17:49 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 62365244092576f62931e3178c4ea5598fd91e7b
Author: Ricardo Wurmus <address@hidden>
Date: Wed Nov 7 23:02:55 2018 +0100
gnu: sortmerna: Fetch sources from git.
* gnu/packages/bioinformatics.scm (sortmerna)[source]: Fetch from git.
---
gnu/packages/bioinformatics.scm | 12 ++++++------
1 file changed, 6 insertions(+), 6 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 744eec5..a571d72 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5948,14 +5948,14 @@ of these reads to align data quickly through a
hash-based indexing scheme.")
(version "2.1b")
(source
(origin
- (method url-fetch)
- (uri (string-append
- "https://github.com/biocore/sortmerna/archive/"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/biocore/sortmerna.git")
+ (commit version)))
+ (file-name (git-file-name name version))
(sha256
(base32
- "1ghaghvd82af9j5adavxh77g7hm247d1r69m3fbi6f1jdivj5ldk"))))
+ "0j3mbz4n25738yijmjbr5r4fyvkgm8v5vn3sshyfvmyqf5q9byqf"))))
(build-system gnu-build-system)
(outputs '("out" ;for binaries
"db")) ;for sequence databases
- branch master updated (b44b1f0 -> f3f34b1), Ricardo Wurmus, 2018/11/07
- 04/14: gnu: raxml: Update to 8.2.12., Ricardo Wurmus, 2018/11/07
- 01/14: gnu: pyicoteo: Fetch sources from git., Ricardo Wurmus, 2018/11/07
- 03/14: gnu: python2-biom-format: Fix build., Ricardo Wurmus, 2018/11/07
- 06/14: gnu: seqtk: Update to 1.3., Ricardo Wurmus, 2018/11/07
- 14/14: gnu: filevercmp: Fetch sources from git., Ricardo Wurmus, 2018/11/07
- 07/14: gnu: preseq: Fetch sources from git., Ricardo Wurmus, 2018/11/07
- 13/14: gnu: ritornello: Update to 2.0.1., Ricardo Wurmus, 2018/11/07
- 05/14: gnu: seqtk: Fetch sources from git., Ricardo Wurmus, 2018/11/07
- 08/14: gnu: preseq: Update to 2.0.3., Ricardo Wurmus, 2018/11/07
- 10/14: gnu: sortmerna: Fetch sources from git.,
Ricardo Wurmus <=
- 09/14: gnu: vsearch: Fetch source from git., Ricardo Wurmus, 2018/11/07
- 02/14: gnu: raxml: Fetch sources from git., Ricardo Wurmus, 2018/11/07
- 11/14: gnu: snap-aligner: Fetch sources from git., Ricardo Wurmus, 2018/11/07
- 12/14: gnu: ritornello: Fetch sources from git., Ricardo Wurmus, 2018/11/07