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Re: build trouble on MacOS 10.5
From: |
Rob Mahurin |
Subject: |
Re: build trouble on MacOS 10.5 |
Date: |
Sun, 20 Dec 2009 14:34:30 -0500 |
User-agent: |
Mutt/1.5.20 (2009-06-14) |
On Sun, Dec 20, 2009 at 01:29:26PM -0500, Ben Abbott wrote:
> On Dec 20, 2009, at 12:30 PM, Rob Mahurin wrote:
> > On Sat, Dec 19, 2009 at 11:52:45PM -0500, Ben Abbott wrote:
> >> I've assumed the bus error is a result of conflicting dylibs. Thus,
> >> I wrote a simple script to list those being linked to so that I may
> >> visually inspect them for conflicts.
> >>
> >> For 10.6.2 I see conflicts for libiconv, libfontconfig, and
> >> libfreetype (maybe others as well, but I'm done looking today).
> >>
> >> Perhaps we can eliminate suspects by comparing results?
> >>
> >> For comparison, I've included my result.
> >
> > Here's my output from your script. How should I interpret this?
> >
> > Rob
> > <dylib_output.txt>
>
> My understanding is that conflicting version of libraries are a
> problem. If I include FLTK in my build, I have libstdc++.dylib from
> both gcc 4.2.1 and gcc 4.4.2 ... which *might* create troubles, but
> that does not appear to be my problem (or yours).
>
> You are linking against libgcc_s.1.dylib from Apple's gcc 4.0.2 (?)
> and MacPorts gcc 4.3.? ... while I'm linking against Apples gcc
> 4.2.1 and Finks gcc 4.4.2.
I have
$ /usr/bin/gcc --version ## from apple
i686-apple-darwin9-gcc-4.0.1 (GCC) 4.0.1 (Apple Inc. build 5493)
$ /opt/local/bin/gcc-mp-4.3 --version ## from macports
gcc-mp-4.3 (GCC) 4.3.4
> I'm not expert in interpreting the back trace, but if I understand correctly
> ...
>
> http://www.caf.dk/cafonly/gnu/gdb/gdb_42.html
>
> ... the bus error for your occurs in
>
> #0 0x03ca4156 in __gnu_cxx::__exchange_and_add ()
> #1 0x03c48526 in std::locale::operator= ()
>
> ... and for me, in close proximity to your example
>
> #0 0x0282902f in std::locale::operator= ()
>
> I'm not sure what "std::locale::operator= ()" refers to, but I'd
> guess it is either libstdc++.6.dylib or maybe libgcc_s.1.dylib. Any
> thoughts?
I agree that the crash seems to happen in the same place, but I don't
understand much more than that.
On the theory that it's a library conflict, I complied with
./configure CC=gcc-mp-4.3 CXX=g++-mp-4.3 F77=gfortran-mp-4.3
LDFLAGS=-L/opt/local/lib --without-framework-carbon
--without-qhull --without-z --without-hdf5 --without-fftw3
--without-fftw3f --without-glpk --without-curl
--without-framework-opengl --without-qrupdate --without-amd
--without-camd --without-colamd --without-ccolamd
--without-cholmod --without-cxsparse --without-umfpack
--without-arpack --disable-readline
That gives me a run-octave that runs without crashing. My build fails
with
Making all in interpreter
../../run-octave -f -q -H -p . --eval "geometryimages ('voronoi',
'eps');"
error: `d_typ' undefined near line 152 column 38
error: evaluating argument list element number 2
error: called from:
error:
/Users/rob/src/octave-all/octave-hg/doc/interpreter/geometryimages.m at line
152, column 7
error:
/Users/rob/src/octave-all/octave-hg/doc/interpreter/geometryimages.m at line
35, column 5
make[3]: *** [voronoi.eps] Error 1
and that error goes away if I make the change in the attached patch.
Now the build succeeds.
$ make check
src/DLD-FUNCTIONS/convhulln.cc ......................... PASS 0/2
FAIL 2
src/mappers.cc ......................................... PASS
257/258 FAIL 1
scripts/specfun/beta.m ................................. ***MESSAGE
FROM ROUTINE DGAMMA IN LIBRARY SLATEC.
***FATAL ERROR, PROG ABORTED, TRACEBACK REQUESTED
* X IS 0
* ERROR NUMBER = 4
*
***END OF MESSAGE
***JOB ABORT DUE TO FATAL ERROR.
0 ERROR MESSAGE SUMMARY
LIBRARY SUBROUTINE MESSAGE START NERR LEVEL
COUNT
SLATEC DGAMMA X IS 0 4 2
1
PASS 5/6 FAIL 1
test_io.m .............................................. PASS 67/68
FAIL 1
Summary:
PASS 5321
FAIL 5
The output of your library script on this runnable octave is
attached. Do you see what is different?
I will start adding libraries one at a time and see where the problem
comes back.
Cheers,
Rob
geometryiamges.patch
Description: Text document
dylib_output.bare.txt
Description: Text document
- Re: build trouble on MacOS 10.5, Rob Mahurin, 2009/12/19
- Re: build trouble on MacOS 10.5, Ben Abbott, 2009/12/19
- Re: build trouble on MacOS 10.5,
Rob Mahurin <=
- Re: build trouble on MacOS 10.5, Ben Abbott, 2009/12/20
- Re: build trouble on MacOS 10.5, Rob Mahurin, 2009/12/21
- Re: build trouble on MacOS 10.5, Rob Mahurin, 2009/12/21
- Re: build trouble on MacOS 10.5, Ben Abbott, 2009/12/21
- Re: build trouble on MacOS 10.5, Ben Abbott, 2009/12/21
- Re: build trouble on MacOS 10.5, Ben Abbott, 2009/12/21
- Re: build trouble on MacOS 10.5, Ben Abbott, 2009/12/21
- Re: build trouble on MacOS 10.5, Ben Abbott, 2009/12/21
- Re: build trouble on MacOS 10.5, Ben Abbott, 2009/12/22
- Re: build trouble on MacOS 10.5 [patch], Rob Mahurin, 2009/12/22