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Re: [igraph] dependency on printr ???


From: Chris Watson
Subject: Re: [igraph] dependency on printr ???
Date: Tue, 9 Dec 2014 12:51:51 -0500

Did you try installing printr from github? It should work just fine. If not, maybe contact Yihui (the developer of printr, and knitr)

On Tue, Dec 9, 2014 at 12:41 PM, Glenn Lawyer <address@hidden> wrote:
Hi,

Running into a funny dependency problem with installing the R interface of the devel branch.

cd interfaces/R
make

yada yada.. everything is ok.

Then:
R :)R CMD INSTALL -l ~/.Rpackages/ igraph_0.7.999-295.tar.gz
ERROR: dependency 'printr' is not available for package 'igraph'

Which is odd, because I can't find the package "printr" on cran?

Probably something to to with the git clean fdx / git pull I ran earlier today, since the builds installed just fine this morning.

+glenn





On 12/09/2014 06:01 PM, address@hidden wrote:
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Today's Topics:

   1.  : compared using membership (patricia)
   2. Re: : compared using membership (G?bor Cs?rdi)
   3.  : compare membership (patricia)


----------------------------------------------------------------------

Message: 1
Date: Tue, 9 Dec 2014 05:45:42 +0300
From: patricia <address@hidden>
To: Help Igraph <address@hidden>
Subject: [igraph]  : compared using membership
Message-ID: <address@hidden>
Content-Type: text/plain; charset="iso-8859-1"

Hello
I wonder how do I compare the elements in the membership vector; I am using the following syntax: membership (communities) [i] == membership (communities) [j]; but the following error occurs:
Error in if (membership (communities) [i] == membership (communities) [j]) {:missing value where TRUE / FALSE needed

Thank you 		 	   		  
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Message: 2
Date: Mon, 8 Dec 2014 21:49:03 -0500
From: G?bor Cs?rdi <address@hidden>
To: Help for igraph users <address@hidden>
Subject: Re: [igraph] : compared using membership
Message-ID:
	<address@hidden>
Content-Type: text/plain; charset=UTF-8

As always, unless you send us a complete reproducible example, we
can't help you.

Gabor

On Mon, Dec 8, 2014 at 9:45 PM, patricia <address@hidden> wrote:
Hello

I wonder how do I compare the elements in the membership vector; I am using
the following syntax: membership (communities) [i] == membership
(communities) [j]; but the following error occurs:

Error in if (membership (communities) [i] == membership (communities) [j])
{:
missing value where TRUE / FALSE needed


Thank you

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------------------------------

Message: 3
Date: Tue, 9 Dec 2014 07:37:03 +0300
From: patricia <address@hidden>
To: Help Igraph <address@hidden>
Subject: [igraph]  : compare membership
Message-ID: <address@hidden>
Content-Type: text/plain; charset="iso-8859-1"

follows function : 
EdgesBetweenClusters <- function(graph, numTrials, numberVertices){  require(igraph);  communities <- infomap.community(graph, v.weights = NULL, modularity = TRUE, nb.trials = numTrials);     for(i in 1:numberVertices-1)  {    for(j in i+1:numberVertices)    {      if(membership(communities)[i] == membership(communities)[j])      {        edgesintracluster <- edgesintracluster + 1;      }       else      {        edgesintercluster <- edgesintercluster + 1;      }    }  }   return(edgesintercluster);} 
=> attached the following file in xml format 		 	   		  
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End of igraph-help Digest, Vol 101, Issue 6
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-- 
--------------------------------------------------------------
     Dr. Glenn Lawyer                    
     +352 661 967 244              
     Max-Planck-Institut für Informatik
     Computational Biology and Applied Algorithmics
     Campus E1 4
     66123 Saarbrücken, Germany
     http://bioinf.mpi-inf.mpg.de/~lawyer


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