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[igraph] Memory-Efficient Graph Saving in Python
From: |
Nick Eubank |
Subject: |
[igraph] Memory-Efficient Graph Saving in Python |
Date: |
Sun, 16 Nov 2014 06:58:26 +0000 |
Hi All,
Trying to save a large graph object using iGraph 0.7 in python 2.7. When I try to save my graph with the following command:
myGraph.save('graph.pkl', format = 'pickle')
my memory use explodes. I could be wrong, but I think the graph is being copied before being saved. The problem is that I have enough RAM for my graph, but not 2x the size of my graph, and so when this happens my computer starts hard-faulting and thrashing.
Is there a way to save my graph without it being duplicated in memory?
Thanks!
Nick
- [igraph] Memory-Efficient Graph Saving in Python,
Nick Eubank <=