Re: [igraph] problems with import of Pajek .net file

[Martin Tomko]

Grrr, I have no idea what is the problem either...
Will test and elaborate...
Martin

On 8/11/2010 2:14 PM, Gábor Csárdi wrote:
> Works fine on OSX as well, igraph 0.5.4, R 2.11.1.
>
> FYI,
> Gabor
>
> On Wed, Aug 11, 2010 at 2:07 PM, Tamas Nepusz<address@hidden>  wrote:
>    
> > Hi again,
> >
> > It works for me in igraph 0.5.3 as well (R 2.11.0, igraph 0.5.3, Linux).
> >
> > --
> > Tamas
> >
> > On Wed, Aug 11, 2010 at 12:20:23PM +0200, Martin Tomko wrote:
> >      
> > > Hi All,
> > > I am experiencing a problem reading a pjek formatted graph (that I
> > > output from my own conversion script). The graph opens fine in Pajek
> > > itself.
> > >
> > > I get the following error:
> > > Fehler in read.graph.pajek(file, ...) :
> > >    At type_indexededgelist.c:245 : cannot add edges, Invalid vertex id
> > >
> > > It is a very simple graph with no fancy attributes, just :
> > >
> > > *Vertices 8309
> > > 1
> > > 2
> > > 3
> > > 4
> > > 5
> > > 6
> > > ...
> > > *Edges
> > > 1 2
> > > 1 7044
> > > 10 985
> > > 100 1901
> > > ...
> > >
> > > I have output many other .net graphs and ingested them into igraph
> > > without problems before, although from a different procedure and
> > > input, so it must be something with the new input graph data I have,
> > > I assume.
> > >
> > > I made sure that the number of vertices is correct, they are
> > > numbered from 1, sequentially, and ordered in the output, and I also
> > > ordered the edges. I have no idea what could be the problem.
> > > Is there a way to enable more verbose debug output from igraph in R,
> > > so that I see which vertex number is the problem?
> > >
> > > the two graphs are available here, if anyone wants to try...:
> > > http://www.geo.uzh.ch/~mtomko/myoutput.net
> > > http://www.geo.uzh.ch/~mtomko/pajektest.net
> > >
> > > Thanks
> > > Martin
> > >
> > >
> > > _______________________________________________
> > > igraph-help mailing list
> > > address@hidden
> > > http://lists.nongnu.org/mailman/listinfo/igraph-help
> > >        
> > _______________________________________________
> > igraph-help mailing list
> > address@hidden
> > http://lists.nongnu.org/mailman/listinfo/igraph-help
> >
> >      
>
>
>    


--
Martin Tomko
Postdoctoral Research Assistant

Geographic Information Systems Division
Department of Geography
University of Zurich - Irchel
Winterthurerstr. 190
CH-8057 Zurich, Switzerland

email:  address@hidden
site:   http://www.geo.uzh.ch/~mtomko
mob:    +41-788 629 558
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fax:    +41-44-6356848