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Problem with installing general package on TACC


From: solarisx
Subject: Problem with installing general package on TACC
Date: Mon, 3 Dec 2012 17:02:40 -0800 (PST)

Hi,

Ranger has the Octave installed, but I don't see any packages installed. I
tried installing the general package in Octave but get the following error.
Has anyone tried installing this package before?

PS. I have loaded the hdf5 module.

Thanks,


octave:1> pkg install -local general-1.3.2.tar.gz
In file included from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov.h:43,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/oct-obj.h:34,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov-fcn.h:32,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov-builtin.h:28,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/defun-int.h:28,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/defun-dld.h:30,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/oct.h:36,
                 from __exit__.cc:16:
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/oct-hdf5.h:27:18:
hdf5.h: No such file or directory
In file included from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov.h:58,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/oct-obj.h:34,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov-fcn.h:32,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov-builtin.h:28,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/defun-int.h:28,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/defun-dld.h:30,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/oct.h:36,
                 from __exit__.cc:16:
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov-base.h:628:
error: `hid_t' has not been declared
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov-base.h:628:
error: ISO C++ forbids declaration of `loc_id' with no type
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov-base.h:631:
error: `hid_t' has not been declared
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov-base.h:631:
error: ISO C++ forbids declaration of `loc_id' with no type
In file included from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/oct-obj.h:34,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov-fcn.h:32,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov-builtin.h:28,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/defun-int.h:28,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/defun-dld.h:30,
                 from
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/oct.h:36,
                 from __exit__.cc:16:
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov.h:1052:
error: `hid_t' has not been declared
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov.h:1053:
error: ISO C++ forbids declaration of `loc_id' with no type
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov.h:1055:
error: `hid_t' has not been declared
/opt/apps/octave/3.6.1/include/octave-3.6.1/octave/../octave/ov.h:1056:
error: ISO C++ forbids declaration of `loc_id' with no type
make: *** [__exit__.oct] Error 1
'make' returned the following error: make: Entering directory
`/tmp/oct-GB3iXd/general/src'
/opt/apps/octave/3.6.1/bin/mkoctfile-3.6.1 __exit__.cc
make: Leaving directory `/tmp/oct-GB3iXd/general/src'
error: called from `pkg>configure_make' in file
/opt/apps/octave/3.6.1/share/octave/3.6.1/m/pkg/pkg.m near line 1385, column
9
error: called from:
error:   /opt/apps/octave/3.6.1/share/octave/3.6.1/m/pkg/pkg.m at line 827,
column 5
error:   /opt/apps/octave/3.6.1/share/octave/3.6.1/m/pkg/pkg.m at line 383,
column 9




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