Re: development version does not compile

[Bertrand Roessli]

Hope it helps... 

address@hidden:~$ hg tip
abort: There is no Mercurial repository here (.hg not found)!
address@hidden:~$ cd octave/
address@hidden:~/octave$ hg tip
changeset:   8731:5abe5ae55465
tag:         tip
user:        Jaroslav Hajek <address@hidden>
date:        Thu Feb 12 10:00:43 2009 +0100
summary:     use lo-traits in oct-inttypes



configure: defining TEMPLATE_AR to be $(AR)
configure: defining TEMPLATE_ARFLAGS to be rc
configure: defining CRUFT_DLL_DEFS to be 
configure: defining OCTAVE_DLL_DEFS to be 
configure: defining OCTINTERP_DLL_DEFS to be 
configure: defining OCTGRAPHICS_DLL_DEFS to be 
configure: defining library_path_var to be LD_LIBRARY_PATH
checking for gethostname... yes
checking for getpwnam... yes
checking for mode_t... yes
checking for off_t... yes
checking for pid_t... yes
checking for size_t... yes
checking for uid_t in sys/types.h... yes
checking for dev_t... yes
checking for ino_t... yes
checking for nlink_t... yes
checking for nlink_t... (cached) yes
checking for long long int... yes
checking for unsigned long long int... yes
checking for sigset_t... yes
checking for sig_atomic_t... yes
checking for short... yes
checking size of short... 2
checking for int... yes
checking size of int... 4
checking for long... yes
checking size of long... 4
checking for long long... yes
checking size of long long... 8
checking for working alloca.h... yes
checking for alloca... yes
checking for an ANSI C-conforming const... yes
checking whether <new> defines placement delete operator... yes
checking whether C++ supports dynamic auto arrays... yes
checking whether fast integer arithmetics is usable... yes
checking for long double... yes
checking size of long double... 12
checking for ANSI C header files... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking whether time.h and sys/time.h may both be included... yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking assert.h usability... yes
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checking curses.h usability... yes
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checking direct.h usability... no
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checking float.h usability... yes
checking float.h presence... yes
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checking floatingpoint.h usability... no
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checking for fcntl... yes
checking for fork... yes
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checking for getcwd... yes
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checking for geteuid... yes
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checking for getgrnam... yes
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checking for getpid... yes
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checking for getpwent... yes
checking for getpwuid... yes
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checking for getuid... yes
checking for getwd... yes
checking for _kbhit... no
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checking for link... yes
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checking for lstat... yes
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checking for strsignal... yes
checking for symlink... yes
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checking for vfprintf... yes
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checking for waitpid... yes
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checking for _snprintf... no
checking for x_utime... no
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checking whether strptime is broken... no
checking whether putenv uses malloc... no
checking mach-o/dyld.h usability... no
checking mach-o/dyld.h presence... no
checking for mach-o/dyld.h... no
checking for shl_load in -ldld... no
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checking for shl_findsym... no
checking for LoadLibrary in -lwsock32... no
checking for LoadLibrary... no
checking for dlopen in -ldl... yes
checking for dlopen... yes
checking for dlsym... yes
checking for dlerror... yes
checking for dlclose... yes
checking whether g++ accepts -rdynamic... yes
checking for struct timeval... yes
checking whether gettimeofday can't accept two arguments... no
checking for finite... yes
checking for isnan... yes
checking for isinf... yes
checking for copysign... yes
checking for signbit... no
checking for _finite... no
checking for _isnan... no
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checking whether signbit is declared... yes
checking for acosh... yes
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checking for asinh... yes
checking for asinhf... yes
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checking for erf... yes
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checking for exp2... yes
checking for exp2f... yes
checking for log2... yes
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checking for hypotf... yes
checking for _hypotf... no
checking for struct stat.st_blksize... yes
checking for struct stat.st_blocks... yes
checking for struct stat.st_rdev... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking for struct tm.tm_zone... yes
checking whether closedir returns void... no
checking for struct group.gr_passwd... no
checking if mkdir takes one argument... no
checking for tputs in -lncurses... yes
checking for rl_set_keyboard_input_timeout in -lreadline... yes
checking for struct exception in math.h... yes
checking return type of signal handlers... void
checking whether sys_siglist is declared... yes
checking for type of signal functions... posix
checking if signal handlers must be reinstalled when invoked... no
checking for getrusage... yes
checking for times... yes
checking for gawk... no
checking for mawk... mawk
checking for gfind... no
checking for find... find
checking for a usable sed... /bin/sed
checking for perl... perl
checking for python... python
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... -lfl
checking whether yytext is a pointer... yes
defining LFLAGS to be -t -I
checking for bison... bison -y
checking whether ln -s works... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking for desktop-file-install... desktop-file-install
checking for gnuplot... gnuplot
checking for less... less
checking for gperf... gperf
checking for gs... gs
checking for makeinfo... makeinfo
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configure: defining UGLY_DEFS to be -DPACKAGE_NAME=\\\\\"\\\\\"
-DPACKAGE_TARNAME=\\\\\"\\\\\" -DPACKAGE_VERSION=\\\\\"\\\\\"
-DPACKAGE_STRING=\\\\\"\\\\\" -DPACKAGE_BUGREPORT=\\\\\"\\\\\"
-DOCTAVE_SOURCE=1 -D_GNU_SOURCE=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1
-DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1
-DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1
-DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DSEPCHAR=\':\' -DSEPCHAR_STR=\\\\
\":\\\\\" -D__NO_MATH_INLINES=1 -DCXX_NEW_FRIEND_TEMPLATE_DECL=1
-DCXX_ISO_COMPLIANT_LIBRARY=1 -DHAVE_X_WINDOWS=1 -DHAVE_LIBM=1
-DHAVE_REGEXEC=1 -DHAVE_REGEX=1 -DHAVE_ZLIB_H=1 -DHAVE_ZLIB=1
-DHAVE_FFTW3=1 -DHAVE_GLPK_H=1 -DHAVE_GLPK=1
-DHAVE_IEEE754_DATA_FORMAT=1 -DF77_FUNC\(name,NAME\)=name\ \#\#\ _
-DF77_FUNC_\(name,NAME\)=name\ \#\#\ __ -DHAVE_BLAS=1
-DHAVE_SUITESPARSE_AMD_H=1 -DHAVE_AMD=1 -DHAVE_SUITESPARSE_UMFPACK_H=1
-DHAVE_UMFPACK=1 -DUMFPACK_SEPARATE_SPLIT=1
-DHAVE_SUITESPARSE_COLAMD_H=1 -DHAVE_COLAMD=1
-DHAVE_SUITESPARSE_CCOLAMD_H=1 -DHAVE_CCOLAMD=1
-DHAVE_SUITESPARSE_CHOLMOD_H=1 -DHAVE_CHOLMOD=1
-DHAVE_SUITESPARSE_CS_H=1 -DHAVE_CXSPARSE=1 -DHAVE_GETHOSTNAME=1
-DHAVE_GETPWNAM=1 -DHAVE_DEV_T=1 -DHAVE_INO_T=1 -DHAVE_NLINK_T=1
-DHAVE_NLINK_T=1 -DHAVE_LONG_LONG_INT=1 -DHAVE_UNSIGNED_LONG_LONG_INT=1
-DHAVE_SIGSET_T=1 -DHAVE_SIG_ATOMIC_T=1 -DSIZEOF_SHORT=2 -DSIZEOF_INT=4
-DSIZEOF_LONG=4 -DSIZEOF_LONG_LONG=8 -DHAVE_ALLOCA_H=1 -DHAVE_ALLOCA=1
-DHAVE_PLACEMENT_DELETE=1 -DHAVE_DYNAMIC_AUTO_ARRAYS=1
-DHAVE_FAST_INT_OPS=1 -DSIZEOF_LONG_DOUBLE=12 -DSTDC_HEADERS=1
-DHAVE_DIRENT_H=1 -DTIME_WITH_SYS_TIME=1 -DHAVE_SYS_WAIT_H=1
-DHAVE_ASSERT_H=1 -DHAVE_CURSES_H=1 -DHAVE_DLFCN_H=1 -DHAVE_FCNTL_H=1
-DHAVE_FLOAT_H=1 -DHAVE_GRP_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1
-DHAVE_LOCALE_H=1 -DHAVE_MEMORY_H=1 -DHAVE_NCURSES_H=1 -DHAVE_POLL_H=1
-DHAVE_PTHREAD_H=1 -DHAVE_PWD_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1
-DHAVE_STRING_H=1 -DHAVE_SYS_IOCTL_H=1 -DHAVE_SYS_PARAM_H=1
-DHAVE_SYS_POLL_H=1 -DHAVE_SYS_RESOURCE_H=1 -DHAVE_SYS_SELECT_H=1
-DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TIME_H=1 -DHAVE_SYS_TIMES_H=1
-DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_UTSNAME_H=1 -DHAVE_TERMCAP_H=1
-DHAVE_UNISTD_H=1 -DHAVE_UTIME_H=1 -DHAVE_SSTREAM=1 -DHAVE_TERMIO_H=1
-DHAVE_SGTTY_H=1 -DHAVE_GLOB_H=1 -DHAVE_FNMATCH_H=1 -DHAVE_FNMATCH=1
-DHAVE_GLOB=1 -DHAVE_ATEXIT=1 -DHAVE_BASENAME=1 -DHAVE_BCOPY=1
-DHAVE_BZERO=1 -DHAVE_CANONICALIZE_FILE_NAME=1 -DHAVE_CHMOD=1
-DHAVE_DUP2=1 -DHAVE_ENDGRENT=1 -DHAVE_ENDPWENT=1 -DHAVE_EXECVP=1
-DHAVE_EXPM1=1 -DHAVE_EXPM1F=1 -DHAVE_FCNTL=1 -DHAVE_FORK=1
-DHAVE_FSTAT=1 -DHAVE_GETCWD=1 -DHAVE_GETEGID=1 -DHAVE_GETEUID=1
-DHAVE_GETGID=1 -DHAVE_GETGRENT=1 -DHAVE_GETGRGID=1 -DHAVE_GETGRNAM=1
-DHAVE_GETPGRP=1 -DHAVE_GETPID=1 -DHAVE_GETPPID=1 -DHAVE_GETPWENT=1
-DHAVE_GETPWUID=1 -DHAVE_GETTIMEOFDAY=1 -DHAVE_GETUID=1 -DHAVE_GETWD=1
-DHAVE_KILL=1 -DHAVE_LGAMMA=1 -DHAVE_LGAMMAF=1 -DHAVE_LGAMMA_R=1
-DHAVE_LGAMMAF_R=1 -DHAVE_LINK=1 -DHAVE_LOCALTIME_R=1 -DHAVE_LOG1P=1
-DHAVE_LOG1PF=1 -DHAVE_LSTAT=1 -DHAVE_MEMMOVE=1 -DHAVE_MKDIR=1
-DHAVE_MKFIFO=1 -DHAVE_MKSTEMP=1 -DHAVE_ON_EXIT=1 -DHAVE_PIPE=1
-DHAVE_POLL=1 -DHAVE_PUTENV=1 -DHAVE_RAISE=1 -DHAVE_READLINK=1
-DHAVE_REALPATH=1 -DHAVE_RENAME=1 -DHAVE_RINDEX=1 -DHAVE_RMDIR=1
-DHAVE_ROUND=1 -DHAVE_ROUNDL=1 -DHAVE_SELECT=1 -DHAVE_SETGRENT=1
-DHAVE_SETLOCALE=1 -DHAVE_SETPWENT=1 -DHAVE_SETVBUF=1 -DHAVE_SIGACTION=1
-DHAVE_SIGLONGJMP=1 -DHAVE_SIGPENDING=1 -DHAVE_SIGPROCMASK=1
-DHAVE_SIGSUSPEND=1 -DHAVE_SNPRINTF=1 -DHAVE_STAT=1 -DHAVE_STRCASECMP=1
-DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRNCASECMP=1 -DHAVE_STRPTIME=1
-DHAVE_STRSIGNAL=1 -DHAVE_SYMLINK=1 -DHAVE_TEMPNAM=1 -DHAVE_TGAMMA=1
-DHAVE_TGAMMAF=1 -DHAVE_TRUNC=1 -DHAVE_UMASK=1 -DHAVE_UNAME=1
-DHAVE_UNLINK=1 -DHAVE_USLEEP=1 -DHAVE_UTIME=1 -DHAVE_VFPRINTF=1
-DHAVE_VSPRINTF=1 -DHAVE_VSNPRINTF=1 -DHAVE_WAITPID=1 -DHAVE_STRFTIME=1
-DHAVE_LIBDL=1 -DHAVE_DLOPEN=1 -DHAVE_DLSYM=1 -DHAVE_DLERROR=1
-DHAVE_DLCLOSE=1 -DHAVE_DLOPEN_API=1 -DENABLE_DYNAMIC_LINKING=1
-DHAVE_TIMEVAL=1 -DHAVE_FINITE=1 -DHAVE_ISNAN=1 -DHAVE_ISINF=1
-DHAVE_COPYSIGN=1 -DHAVE_DECL_SIGNBIT=1 -DHAVE_ACOSH=1 -DHAVE_ACOSHF=1
-DHAVE_ASINH=1 -DHAVE_ASINHF=1 -DHAVE_ATANH=1 -DHAVE_ATANHF=1
-DHAVE_ERF=1 -DHAVE_ERFF=1 -DHAVE_ERFC=1 -DHAVE_ERFCF=1 -DHAVE_EXP2=1
-DHAVE_EXP2F=1 -DHAVE_LOG2=1 -DHAVE_LOG2F=1 -DHAVE_HYPOTF=1
-DHAVE_STRUCT_STAT_ST_BLKSIZE=1 -DHAVE_STRUCT_STAT_ST_BLOCKS=1
-DHAVE_STRUCT_STAT_ST_RDEV=1 -DHAVE_STRUCT_TM_TM_ZONE=1 -DHAVE_TM_ZONE=1
-DUSE_READLINE=1 -DEXCEPTION_IN_MATH=1 -DRETSIGTYPE=void
-DHAVE_DECL_SYS_SIGLIST=1 -DHAVE_POSIX_SIGNALS=1 -DRETSIGTYPE_IS_VOID=1
-DHAVE_GETRUSAGE=1 -DHAVE_TIMES=1 -DYYTEXT_POINTER=1
checking whether gcc accepts -Wall... yes
adding -Wall to WARN_CFLAGS
checking whether gcc accepts -W... yes
adding -W to WARN_CFLAGS
checking whether gcc accepts -Wshadow... yes
adding -Wshadow to WARN_CFLAGS
checking whether g++ accepts -Wall... yes
adding -Wall to WARN_CXXFLAGS
checking whether g++ accepts -W... yes
adding -W to WARN_CXXFLAGS
checking whether g++ accepts -Wshadow... yes
adding -Wshadow to WARN_CXXFLAGS
checking whether g++ accepts -Wold-style-cast... yes
adding -Wold-style-cast to WARN_CXXFLAGS
configure: creating ./config.status
config.status: creating Makefile
config.status: creating octMakefile
config.status: creating Makeconf
config.status: creating test/Makefile
config.status: creating doc/Makefile
config.status: creating doc/faq/Makefile
config.status: creating doc/interpreter/Makefile
config.status: creating doc/liboctave/Makefile
config.status: creating doc/refcard/Makefile
config.status: creating emacs/Makefile
config.status: creating examples/Makefile
config.status: creating examples/@polynomial/Makefile
config.status: creating liboctave/Makefile
config.status: creating liboctave/oct-types.h
config.status: creating src/Makefile
config.status: creating src/mxarray.h
config.status: creating libcruft/Makefile
config.status: creating libcruft/Makerules
config.status: creating libcruft/amos/Makefile
config.status: creating libcruft/blas/Makefile
config.status: creating libcruft/daspk/Makefile
config.status: creating libcruft/dasrt/Makefile
config.status: creating libcruft/dassl/Makefile
config.status: creating libcruft/fftpack/Makefile
config.status: creating libcruft/lapack/Makefile
config.status: creating libcruft/misc/Makefile
config.status: creating libcruft/odepack/Makefile
config.status: creating libcruft/ordered-qz/Makefile
config.status: creating libcruft/quadpack/Makefile
config.status: creating libcruft/ranlib/Makefile
config.status: creating libcruft/slatec-fn/Makefile
config.status: creating libcruft/slatec-err/Makefile
config.status: creating libcruft/villad/Makefile
config.status: creating libcruft/blas-xtra/Makefile
config.status: creating libcruft/lapack-xtra/Makefile
config.status: creating config.h
config.status: config.h is unchanged
=== configuring in scripts (/home/broessli/octave/scripts)
configure: running /bin/bash ./configure '--prefix=/usr/local'
--cache-file=/dev/null --srcdir=.
checking for a BSD-compatible install... /usr/bin/install -c
configure: creating ./config.status
config.status: creating Makefile
config.status: creating audio/Makefile
config.status: creating deprecated/Makefile
config.status: creating elfun/Makefile
config.status: creating general/Makefile
config.status: creating geometry/Makefile
config.status: creating help/Makefile
config.status: creating image/Makefile
config.status: creating io/Makefile
config.status: creating linear-algebra/Makefile
config.status: creating miscellaneous/Makefile
config.status: creating optimization/Makefile
config.status: creating path/Makefile
config.status: creating pkg/Makefile
config.status: creating plot/Makefile
config.status: creating polynomial/Makefile
config.status: creating set/Makefile
config.status: creating signal/Makefile
config.status: creating sparse/Makefile
config.status: creating specfun/Makefile
config.status: creating special-matrix/Makefile
config.status: creating startup/Makefile
config.status: creating statistics/Makefile
config.status: creating statistics/base/Makefile
config.status: creating statistics/distributions/Makefile
config.status: creating statistics/models/Makefile
config.status: creating statistics/tests/Makefile
config.status: creating strings/Makefile
config.status: creating time/Makefile
config.status: creating testfun/Makefile
configure:

Octave is now configured for i686-pc-linux-gnu

  Source directory:     .
  Installation prefix:  /usr/local
  C compiler:           gcc  -mieee-fp  -Wall -W -Wshadow -g -O2
  C++ compiler:         g++  -mieee-fp  -Wall -W -Wshadow
-Wold-style-cast -g -O2
  Fortran compiler:     f77 -O -mieee-fp
  Fortran libraries:    
  BLAS libraries:       -llapack -lblas
  FFTW libraries:       -lfftw3 -lfftw3f
  GLPK libraries:       -lglpk
  UMFPACK libraries:    -lumfpack
  AMD libraries:        -lamd
  CAMD libraries:       -lcamd
  COLAMD libraries:     -lcolamd
  CCOLAMD libraries:    -lccolamd
  CHOLMOD libraries:    -lcholmod
  CXSPARSE libraries:   -lcxsparse
  ARPACK libraries:     
  QRUPDATE libraries:   
  HDF5 libraries:       
  CURL libraries:       
  REGEX libraries:      
  QHULL libraries:      
  OPENGL libraries:     
  FLTK backend libs:    
  X11 include flags:    
  X11 libraries:        -lX11
  LIBS:                 -lreadline  -lncurses -ldl -lblas -lz -lm 
  Default pager:        less
  gnuplot:              gnuplot
  Magick config:        

  Do internal array bounds checking:  false
  Build static libraries:             false
  Build shared libraries:             true
  Dynamic Linking:                    true (dlopen)
  Include support for GNU readline:   true
  64-bit array dims and indexing:     false

configure: WARNING: qrupdate not found. The QR & Cholesky updating
functions will be slow.
configure: WARNING: arpack not found. This will result in a lack of the
eigs function.
configure: WARNING: GraphicsMagick++ config script not found.  Assuming
GraphicsMagic++ library and header files are missing, so imread will not
be fully functional
configure: WARNING: PCRE library not found.  This will result in some
loss of functionality for the regular expression matching functions.
configure: WARNING: Qhull library not found --- This will result in loss
of functionality of some geometry functions.
configure: WARNING: "FLTK config script not found.  Native graphics will
be disabled."
configure: WARNING: 
configure: WARNING: I didn't find the necessary libraries to compile
native
configure: WARNING: graphics. It isn't necessary to have native graphics
configure: WARNING: but you will have to use gnuplot or you won't be
able
configure: WARNING: to use any of Octave's plotting commands
configure: WARNING: 
configure:

NOTE: libraries may be skipped if a library is not found OR
      if the library on your system is missing required features.





On Thu, 2009-02-12 at 12:59 +0100, Jaroslav Hajek wrote:
> On Thu, Feb 12, 2009 at 12:45 PM, Bertrand Roessli
> <address@hidden> wrote:
> > Hello,
> >
> > I am trying to compile the development version and
> > it does not compile properly
> >
> > ../libcruft/libcruft.so: undefined reference to `s_cat'
> > ../src/liboctinterp.so: undefined reference to `do_fio'
> > ../src/liboctinterp.so: undefined reference to `e_wsfe'
> > ../libcruft/libcruft.so: undefined reference to `c_abs'
> > ../libcruft/libcruft.so: undefined reference to `d_mod'
> > collect2: ld returned 1 exit status
> > make[2]: *** [octave] Error 1
> > make[2]: Leaving directory `/home/broessli/octave/src'
> > make[1]: *** [src] Error 2
> > make[1]: Leaving directory `/home/broessli/octave'
> > make: *** [all] Error 2
> >
> > Any hint? Thank you,
> >
> > Bertrand Roessli
> >
> 
> "Development version" alone is too vague, as it changes every day. If
> you got a snapshot from the Savannah mercurial archive, please state
> the tip ID (hg tip). Otherwise, say "I'm compiling 3.1.52" or
> something.
> Also, including your configuration info would be helpful.
> 
> Judging by previous experience, I'd say these look like references to
> the fortran runtime library.
> 
> cheers
>