Re: No luck with singularity (/var/singularity/mnt/container not found)

[Wiktor Żelazny]

On Thu, Nov 21, 2019 at 12:29:38AM -0500, Eric Bavier wrote:

>   (operating-system
>     ;; ...
>     (services
>       (cons (service singularity-service-type)
>             %base-services)))

Hi Eric,

Thanks a lot. It’s not in the on-line version of the manual, so I
missed it. Unfortunately, now I’m getting

   ERROR  : No valid /bin/sh in container
   ABORT  : Retval = 255

even while following the tutorial [1]:

   $ guix pack -f docker -S /bin=bin hwloc

   substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%
   substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%
   The following derivations will be built:
      /gnu/store/81bzccc2r3lm4zkk9n55z1r9mh10lg0p-docker-pack.tar.gz.drv
      /gnu/store/0v50h4xbaxmawpm1fngg8b7gmlf3vj1m-module-import.drv
      /gnu/store/1m60igyjnkq1xr91x61kh0k0r680jwhs-module-import-compiled.drv
      /gnu/store/wi9mikyalfq5bjn0b41w1k2vbrbxp8vq-profile.drv
   2.9 MB will be downloaded:
      /gnu/store/2zi4y374rvsp4xld4cdw8x6imjjczp26-hwloc-2.1.0-debug
      /gnu/store/cyd4qzrl2h7phpj0skv9xp6nybybvl2r-hwloc-2.1.0-lib
      /gnu/store/2jqmr45v6fqsvpad515v73nsvbb1l8rb-hwloc-2.1.0
   The following graft will be made:
      /gnu/store/5lfv9vrmmkrqj1qipgll5gqls2hnah6n-hwloc-2.1.0.drv
   The following profile hooks will be built:
      /gnu/store/3w23faaw1402xb23lff9kmnrah4qjdny-xdg-mime-database.drv
      /gnu/store/7k9sblz8z4d524s7cgbkfam1zifz7xsi-xdg-desktop-database.drv
      /gnu/store/7x6vc9qb6aap2515wak2kk3y2d55sq4y-glib-schemas.drv
      /gnu/store/aajx31a1sx28vxfh2wwkswammr22aym6-info-dir.drv
      /gnu/store/l9r0z6l7x52xdqwmvqwydmhh2yl899wz-fonts-dir.drv
      /gnu/store/w1079rvgnhqjghw770lbh45h1j661pi8-ca-certificate-bundle.drv
      /gnu/store/zvagzwgd1ac0zq4c435kq01mwbc4fda4-manual-database.drv
   building /gnu/store/0v50h4xbaxmawpm1fngg8b7gmlf3vj1m-module-import.drv...
   downloading from 
https://ci.guix.gnu.org/nar/lzip/cyd4qzrl2h7phpj0skv9xp6nybybvl2r-hwloc-2.1.0-lib...
   hwloc-2.1.0-lib  186KiB                                                      
                                                                                
                                      164KiB/s 00:01 [##################] 100.0%

   building 
/gnu/store/1m60igyjnkq1xr91x61kh0k0r680jwhs-module-import-compiled.drv...
   downloading from 
https://ci.guix.gnu.org/nar/lzip/2jqmr45v6fqsvpad515v73nsvbb1l8rb-hwloc-2.1.0...
   hwloc-2.1.0  2.1MiB                                                          
                                                                                
                                       82KiB/s 00:26 [##################] 100.0%

   downloading from 
https://ci.guix.gnu.org/nar/lzip/2zi4y374rvsp4xld4cdw8x6imjjczp26-hwloc-2.1.0-debug...
   hwloc-2.1.0-debug  479KiB                                                    
                                                                                
                                       47KiB/s 00:10 [##################] 100.0%

   applying 3 grafts for 
/gnu/store/5lfv9vrmmkrqj1qipgll5gqls2hnah6n-hwloc-2.1.0.drv...
   building CA certificate bundle...
   building fonts directory...
   generating GLib schema cache...
   building directory of Info manuals...
   building database for manual pages...
   building XDG desktop file cache...
   building XDG MIME database...
   building /gnu/store/wi9mikyalfq5bjn0b41w1k2vbrbxp8vq-profile.drv...
   building 
/gnu/store/81bzccc2r3lm4zkk9n55z1r9mh10lg0p-docker-pack.tar.gz.drv...
   /gnu/store/36x4jdzz7fm3gwkfy5cw7hh2bbz4mck0-docker-pack.tar.gz

   $ singularity exec 
/gnu/store/36x4jdzz7fm3gwkfy5cw7hh2bbz4mck0-docker-pack.tar.gz /bin/lstopo
   Opening tar archive, stand by...
   ERROR  : No valid /bin/sh in container
   ABORT  : Retval = 255

[1]: https://hpc.guix.info/blog/2017/10/using-guix-without-being-root/

WŻ

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