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Re: [PATCH 3/4] gnu: Add barrnap.


From: Ricardo Wurmus
Subject: Re: [PATCH 3/4] gnu: Add barrnap.
Date: Sun, 04 Dec 2016 16:51:26 +0100
User-agent: mu4e 0.9.16; emacs 25.1.1

Marius Bakke <address@hidden> writes:

> Ben Woodcroft <address@hidden> writes:
>
>> * gnu/packages/bioinformatics.scm (barrnap): New variable.

[…]

>> +16S) and eukaryotes (5S, 5.8S, 28S, 18S).  It takes FASTA DNA sequence as 
>> input,
>> +and write GFF3 as output.  It uses the NHMMER tool that comes with HMMER for
>> +HMM searching in RNA:DNA style.")
>> +   (license (list license:gpl3
>> +                  ;; The Rfam HMMs are under cc0, and the SILVA-derived 
>> HMMs are
>> +                  ;; academic-only.
>
> I don't think we can package the SILVA files. They are very much
> non-free according to the license text:

You’re right!  Ben, could you delete them from the package in a snippet?

-- 
Ricardo

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