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Re: [PATCH] Add CD-HIT


From: Ben Woodcroft
Subject: Re: [PATCH] Add CD-HIT
Date: Fri, 11 Mar 2016 11:02:32 -0500
User-agent: Mozilla/5.0 (X11; Linux x86_64; rv:38.0) Gecko/20100101 Thunderbird/38.5.1

Hi Ricardo,

Looks good, and much the same as the patch I hadn't got around to submitting minus your good work with determinism.

On 11/03/16 09:18, Ricardo Wurmus wrote:
+    (description
+     "CD-HIT is a program for clustering and comparing protein or nucleotide
+sequences.  CD-HIT is very fast and can handle extremely large databases.
+CD-HIT helps to significantly reduce the computational and manual efforts in
+many sequence analysis tasks and aids in understanding the data structure and
+correct the bias within a dataset.")

I didn't understand that last sentence, and I thought the 2nd sentence was a bit too opinionated. In my patch the description was simply:

+    (description
+ "CD-HIT is a program for clustering and comparing protein or nucleotide
+sequences.  CD-HIT is designed to be fast and handle extremely large
+databases.")

HTH,
ben



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