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07/07: gnu: r-pando: Update to 1.0.5.
From: |
guix-commits |
Subject: |
07/07: gnu: r-pando: Update to 1.0.5. |
Date: |
Thu, 29 Jun 2023 06:05:25 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 10ff8ff4b5655b9f4dbb68535b949bd67c3b8028
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Jun 29 11:59:51 2023 +0200
gnu: r-pando: Update to 1.0.5.
* gnu/packages/bioinformatics.scm (r-pando): Update to 1.0.5.
[propagated-inputs]: Remove r-brms and r-xgboost; add r-grr and
r-matrixgenerics.
---
gnu/packages/bioinformatics.scm | 10 +++++-----
1 file changed, 5 insertions(+), 5 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 87e7c33b90..0999d066bf 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9673,7 +9673,7 @@ differently labelled data.")
(define-public r-pando
(package
(name "r-pando")
- (version "1.0.1")
+ (version "1.0.5")
(source
(origin
(method git-fetch)
@@ -9682,21 +9682,22 @@ differently labelled data.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "0c83anzdrbvg47p9xns2bxpjlx5z328can3jmzilw6rygwp7hyii"))))
+ (base32 "04gii2ciyvybifl8kxqqmhznha80l3fd8qcr5zshrn9n6js5322c"))))
(properties `((upstream-name . "Pando")))
(build-system r-build-system)
(propagated-inputs
(list r-bayestestr
- r-brms
r-foreach
r-genomicranges
r-ggplot2
r-ggpointdensity
r-ggraph
r-glmnetutils
+ r-grr
r-iranges
r-irlba
r-matrix
+ r-matrixgenerics
r-motifmatchr
r-pals
r-patchwork
@@ -9706,8 +9707,7 @@ differently labelled data.")
r-tfbstools
r-tidygraph
r-tidyverse
- r-uwot
- r-xgboost))
+ r-uwot))
(native-inputs (list r-knitr))
(home-page "https://github.com/quadbiolab/Pando")
(synopsis "Infer regulomes from multi-modal single-cell genomics data")
- branch master updated (b24a05830d -> 10ff8ff4b5), guix-commits, 2023/06/29
- 03/07: gnu: openjdk19: Update to 19.0.2., guix-commits, 2023/06/29
- 05/07: gnu: Add python-affine., guix-commits, 2023/06/29
- 01/07: gnu: python-threadpoolctl: Update to 3.1.0., guix-commits, 2023/06/29
- 07/07: gnu: r-pando: Update to 1.0.5.,
guix-commits <=
- 06/07: gnu: Add python-rasterio., guix-commits, 2023/06/29
- 04/07: gnu: Add python-snuggs., guix-commits, 2023/06/29
- 02/07: gnu: python-distributed: Disable timeout test., guix-commits, 2023/06/29