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31/33: gnu: Add rust-rust-htslib-0.38.
From: |
guix-commits |
Subject: |
31/33: gnu: Add rust-rust-htslib-0.38. |
Date: |
Thu, 22 Sep 2022 18:25:27 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit dbf54f43c4cce800d4432395c25feb0c172de3fc
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Sep 22 22:54:05 2022 +0200
gnu: Add rust-rust-htslib-0.38.
* gnu/packages/crates-io.scm (rust-rust-htslib-0.38): New variable.
---
gnu/packages/crates-io.scm | 43 +++++++++++++++++++++++++++++++++++++++++++
1 file changed, 43 insertions(+)
diff --git a/gnu/packages/crates-io.scm b/gnu/packages/crates-io.scm
index 84f2b6e3f3..5f6245f13c 100644
--- a/gnu/packages/crates-io.scm
+++ b/gnu/packages/crates-io.scm
@@ -51742,6 +51742,49 @@ please consider using @code{async-std} or
@code{tokio}.")
(inputs
(list sqlite))))
+(define-public rust-rust-htslib-0.38
+ (package
+ (name "rust-rust-htslib")
+ (version "0.38.2")
+ (source (origin
+ (method url-fetch)
+ (uri (crate-uri "rust-htslib" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "070sihnvyiyqcw8yjkdl8hvav598bsw36m722phgd2b394k6djia"))))
+ (build-system cargo-build-system)
+ (arguments
+ ;; TODO: cannot find openssl_src
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-bio-types" ,rust-bio-types-0.12)
+ ("rust-byteorder" ,rust-byteorder-1)
+ ("rust-custom-derive" ,rust-custom-derive-0.1)
+ ("rust-derive-new" ,rust-derive-new-0.5)
+ ("rust-hts-sys" ,rust-hts-sys-2)
+ ("rust-ieee754" ,rust-ieee754-0.2)
+ ("rust-lazy-static" ,rust-lazy-static-1)
+ ("rust-libc" ,rust-libc-0.2)
+ ("rust-linear-map" ,rust-linear-map-1)
+ ("rust-newtype-derive" ,rust-newtype-derive-0.1)
+ ("rust-regex" ,rust-regex-1)
+ ("rust-serde" ,rust-serde-1)
+ ("rust-serde-bytes" ,rust-serde-bytes-0.11)
+ ("rust-thiserror" ,rust-thiserror-1)
+ ("rust-url" ,rust-url-2))
+ #:cargo-development-inputs
+ (("rust-bincode" ,rust-bincode-1)
+ ("rust-pretty-assertions" ,rust-pretty-assertions-0.6))))
+ (inputs (list openssl))
+ (native-inputs (list pkg-config))
+ (home-page "https://github.com/rust-bio/rust-htslib.git")
+ (synopsis "HTSlib bindings and API for reading and writing BAM files")
+ (description
+ "This library provides HTSlib bindings and a high level Rust API for
+reading and writing BAM files.")
+ (license license:expat)))
+
(define-public rust-rustsec-0.25
(package
(name "rust-rustsec")
- 13/33: gnu: Add rust-arr-macro-impl-0.1., (continued)
- 13/33: gnu: Add rust-arr-macro-impl-0.1., guix-commits, 2022/09/22
- 26/33: gnu: Add rust-executors-0.9., guix-commits, 2022/09/22
- 27/33: gnu: Add rust-coitrees-0.2., guix-commits, 2022/09/22
- 32/33: gnu: Add rust-libradicl-0.4., guix-commits, 2022/09/22
- 23/33: gnu: Add rust-obj-0.10., guix-commits, 2022/09/22
- 20/33: gnu: Add rust-console-log-0.2., guix-commits, 2022/09/22
- 17/33: gnu: Add rust-synchronoise-1., guix-commits, 2022/09/22
- 04/33: gnu: rust-arrayvec-0.7: Update to 0.7.2., guix-commits, 2022/09/22
- 09/33: gnu: Add rust-metrics-macros-0.2., guix-commits, 2022/09/22
- 33/33: gnu: Add mudskipper., guix-commits, 2022/09/22
- 31/33: gnu: Add rust-rust-htslib-0.38.,
guix-commits <=
- 28/33: gnu: Add rust-sce-0.1., guix-commits, 2022/09/22
- 29/33: gnu: Add rust-needletail-0.4., guix-commits, 2022/09/22
- 21/33: gnu: rust-winit: Add missing development inputs., guix-commits, 2022/09/22
- 18/33: gnu: Add rust-indicatif-0.16., guix-commits, 2022/09/22
- 15/33: gnu: Add rust-quickersort-3., guix-commits, 2022/09/22
- 11/33: gnu: Add rust-linear-map-1., guix-commits, 2022/09/22
- 30/33: gnu: Add rust-hts-sys-2., guix-commits, 2022/09/22