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161/242: gnu: python-pynndescent: Update to 0.5.6.
From: |
guix-commits |
Subject: |
161/242: gnu: python-pynndescent: Update to 0.5.6. |
Date: |
Thu, 12 May 2022 14:14:24 -0400 (EDT) |
apteryx pushed a commit to branch master
in repository guix.
commit 06b0512260b366513c7f3c3e8f9a6b298da968b7
Author: Maxim Cournoyer <maxim.cournoyer@gmail.com>
AuthorDate: Mon Apr 18 17:43:43 2022 -0400
gnu: python-pynndescent: Update to 0.5.6.
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.6.
[phases]{check}: Skip the test_weighted_minkowski test.
[native-inputs, propagated-inputs]: Re-indent.
---
gnu/packages/machine-learning.scm | 18 +++++++++++-------
1 file changed, 11 insertions(+), 7 deletions(-)
diff --git a/gnu/packages/machine-learning.scm
b/gnu/packages/machine-learning.scm
index b765257d98..5f14453f01 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -1210,13 +1210,13 @@ for scientific computing and data science (e.g. BLAS
and OpenMP).")
(define-public python-pynndescent
(package
(name "python-pynndescent")
- (version "0.5.5")
+ (version "0.5.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pynndescent" version))
(sha256
- (base32 "10pqqqc3jkpw03cyzy04slxmpgyhqnlgbyk0c1cv7kqr5d0zhzbs"))))
+ (base32 "0p3jsdcprjfzz7qf5674dsqfpvdn6p4wgqikg7b6ki5abf433yv1"))))
(build-system python-build-system)
(arguments
`(#:phases
@@ -1224,12 +1224,16 @@ for scientific computing and data science (e.g. BLAS
and OpenMP).")
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
- (add-installed-pythonpath inputs outputs)
- (invoke "python" "-m" "pytest" "--pyargs" "pynndescent")))))))
- (native-inputs
- (list python-pytest))
+ (invoke "python" "-m" "pytest" "--pyargs" "pynndescent"
+ ;; wminkowski no longer exists in scipy 1.8.0 (see:
+ ;; https://github.com/lmcinnes/pynndescent/issues/177)
+ "-k" "not test_weighted_minkowski")))))))
+ (native-inputs (list python-pytest))
(propagated-inputs
- (list python-joblib python-llvmlite python-numba python-scikit-learn
+ (list python-joblib
+ python-llvmlite
+ python-numba
+ python-scikit-learn
python-scipy))
(home-page "https://github.com/lmcinnes/pynndescent")
(synopsis "Nearest neighbor descent for approximate nearest neighbors")
- 150/242: gnu: python-falcon: Update to 3.1.0., (continued)
- 150/242: gnu: python-falcon: Update to 3.1.0., guix-commits, 2022/05/12
- 156/242: gnu: python-llvmlite: Update to 0.38.0., guix-commits, 2022/05/12
- 160/242: gnu: python-scikit-learn: Parallelize build and test suite., guix-commits, 2022/05/12
- 162/242: gnu: python-umap-learn: Update to 0.5.3., guix-commits, 2022/05/12
- 167/242: gnu: python-jupyter-protocol: Update to 0.2.0., guix-commits, 2022/05/12
- 174/242: gnu: conan: Update to 1.47.0 and relax PyYAML requirement., guix-commits, 2022/05/12
- 175/242: gnu: python-parse-type: Update to 0.6.0, fixing build., guix-commits, 2022/05/12
- 172/242: gnu: python-readme-renderer: Update to 34.0., guix-commits, 2022/05/12
- 183/242: gnu: Add python-toolrack., guix-commits, 2022/05/12
- 197/242: gnu: Remove python-orator due to being broken and unmaintained., guix-commits, 2022/05/12
- 161/242: gnu: python-pynndescent: Update to 0.5.6.,
guix-commits <=
- 194/242: gnu: Remove python2-jmespath., guix-commits, 2022/05/12
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- 180/242: gnu: python-celery: Update to 5.2.6 and enable tests., guix-commits, 2022/05/12
- 179/242: gnu: python-kombu: Update to 5.2.4., guix-commits, 2022/05/12
- 191/242: gnu: Add python-crccheck., guix-commits, 2022/05/12
- 203/242: gnu: setzer: Add python-wrapper to fix build., guix-commits, 2022/05/12
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- 210/242: snippets: Add a 'remove' snippet., guix-commits, 2022/05/12
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