branch master updated (a1cb645d83 -> 93baba6475)

[guix-commits]

apteryx pushed a change to branch master
in repository guix.

    from a1cb645d83 gnu: python-packaging-bootstrap: Add python2-variant 
property.
     new df53689c51 gnu: python-ipython: Re-order fields.
     new a116f7fdee gnu: python-astroid: Propagate python-typing-extensions.
     new dc04cf5598 gnu: Add python-pure-eval.
     new 952c8f805c gnu: Add python-asttokens.
     new 68d7bc9ee5 gnu: Add python-littleutils.
     new 9d31c06992 gnu: Add python-stack-data.
     new 812f2a185a gnu: python-traitlets: Update to 5.1.1.
     new e6f46eabbd gnu: python-jinja2: Update to 3.1.1.
     new 23d2319f9a gnu: python-prompt-toolkit: Update to 3.0.29.
     new 1c8264d62e gnu: python-ipython: Update to 8.2.0 [fixes CVE-2022-21699].
     new 7cab14c336 gnu: python-nbformat: Update to 5.3.0.
     new ce73cadd34 gnu: Add texlive-paralist.
     new ff02979ed5 gnu: Add texlive-stix2-otf.
     new fba5c0ca31 gnu: Add texlive-metalogo.
     new 92f573f63a gnu: Add texlive-makecmds.
     new 5d40463875 gnu: Add texlive-csplain.
     new 5289d28515 gnu: Add texlive-cs.
     new 13c19e3bfb gnu: Add texlive-zref.
     new dcd97606a3 gnu: Add python-pcpp.
     new 8907dcce77 gnu: Add opentype-sanitizer.
     new 9e29cf8d73 gnu: Add python-opentype-sanitizer.
     new 2c7e76ed14 gnu: Add python-defcon-bootstrap.
     new dc5cf89205 gnu: Add python-fontmath.
     new 9b6bad8c33 gnu: Add python-unicodedata2.
     new 51b36ab71f gnu: python-fonttools-with-test: Rename to 
python-fonttools-full.
     new b24aefa615 gnu: Add python-mutatormath.
     new 9fffc12efb gnu: Add python-fontpens-bootstrap.
     new f85c6ae421 gnu: Add python-booleanoperations.
     new 16ca467344 gnu: Add python-fontparts-bootstrap.
     new 19cb21c749 gnu: Add python-fontpens.
     new 0ce611f563 gnu: Add python-defcon.
     new e3d1e821f9 gnu: Add python-fontparts.
     new b93a63d4a0 gnu: Add python-cu2qu.
     new ab2bab6d48 gnu: Add python-ufoprocessor.
     new 63a77de2fc gnu: Add python-ufonormalizer.
     new 21db2a0848 gnu: Add python-types-toml.
     new 5475a267ea gnu: Add python-pytest-mypy.
     new ab1dc1f162 gnu: Add python-jaraco-context-bootstrap.
     new 3d72680d0e gnu: Add python-jaraco-functools-bootstrap.
     new 21f29263f3 gnu: Add python-autocommand.
     new 08b524fa78 gnu: Add python-types-freezegun.
     new 586ef9b9cf gnu: Add python-types-pytz.
     new 3ce8459aa7 gnu: Add python-pytest-freezegun.
     new e96c2dcabf gnu: Add python-pytest-enabler-bootstrap.
     new fc7fc0764b gnu: Add python-path-bootstrap.
     new 040615d8f8 gnu: Add python-pip-run-bootstrap.
     new b25a2c7c40 gnu: python-importlib-metadata: Update to 4.11.3.
     new c014b00b28 gnu: python-pytest-black: Update to 0.3.12.
     new c29f9f72cd gnu: python-mypy: Update to 0.942 and fix search path.
     new bd152b5475 gnu: Add python-types-docutils.
     new 529318bd22 gnu: python-pytest-checkdocs: Update to 2.7.1.
     new f761974b12 gnu: Add python-jaraco-classes.
     new 26d92095d6 gnu: Add python-jaraco-context.
     new 59944e875a gnu: Add python-jaraco-functools.
     new 9010b1adfd gnu: Add python-pytest-enabler.
     new 831bf98f6c gnu: Add python-path.
     new a293faef3f gnu: Add python-pip-run.
     new 0be033d3c5 gnu: Add python-tempora.
     new 9175b8d6ba gnu: Add python-pytest-perf.
     new b391578a24 gnu: python-factory-boy: Update to 3.2.1.
     new a749fbea4e gnu: python-faker: Update to 13.3.4 and honor TESTS?.
     new 1702331d01 gnu: Add python-pytest-randomly.
     new f11eebdd9e gnu: Add psautohint-font-data.
     new eba493b369 gnu: Add psautohint.
     new e91180f450 gnu: Add python-ordered-set.
     new 06aa3cad61 gnu: Add python-xdoctest.
     new 5c41c122a5 gnu: Add python-ubelt.
     new 520cdf8058 gnu: python-setuptools: Update to 62.0.0.
     new c6c2e3710b gnu: python-pathpy: Deprecate by python-path.
     new f2be0c5b2b gnu: python-pytest-shutil: Adjust to use python-path.
     new 0f8bb67dbb gnu: python-pytest-cov: Update to 3.0.0.
     new 5324bff060 gnu: Add python-scikit-build.
     new 3f66c30dbd gnu: python-jupyter-packaging: Update to 0.12.0, run test 
suite.
     new 5a3634f461 gnu: python-scipy: Move input fields below arguments field.
     new cddedb9c5b gnu: python-scipy: Update to 1.8.0 and enable parallel 
build.
     new 7eb8ab9412 gnu: Add java-antlr4-runtime-cpp.
     new 4f8bd85506 gnu: Add python-fonttools-next.
     new 6133af89b9 gnu: Add python-afdko.
     new 7e2d11f417 gnu: Add python-cffsubr.
     new f78ef31824 gnu: Add skia.
     new 25b4c8a024 gnu: Add python-skia-pathops.
     new 7e776ea007 gnu: Add python-ufolib2.
     new 1e02c28a2a gnu: Add python-compreffor.
     new 51f0c0af2d gnu: Add python-ufo2ft.
     new 05cbfea0b2 gnu: Add python-sfdlib.
     new e452987714 gnu: Add font-amiri.
     new dd12832a25 gnu: Add font-sil-ezra.
     new 4ab2aad02b gnu: Add texlive-bidi.
     new 5551f646c7 gnu: Add font-gfs-ambrosia.
     new 2b22de8923 gnu: python-click: Update to 8.1.2 and honor TESTS?.
     new cce678ab82 gnu: python-flask: Update to 2.1.1.
     new bd1f8cdf52 gnu: Add python-untangle.
     new 86be766874 gnu: python-black: Update to 22.3.0.
     new 476ae98d0b gnu: pylint: Run tests in parallel.
     new 33570ca6bd gnu: python-trio: Update to 0.20.0.
     new 61c8a13f50 gnu: Add python-pydevd.
     new 08199a93c8 gnu: Add python-debugpy.
     new 4b6500f972 gnu: python-greenlet: Update to 1.1.2.
     new 44dc0f0f0b gnu: Add python-pytest-forked-next.
     new 59e51d8f1c gnu: python-pytest-xdist-next: Update to 2.5.0.
     new d5ee3dcf9e gnu: Add python-ipyparallel-bootstrap.
     new 1ca00ddbbe gnu: python-nest-asyncio: Update to 1.5.5.
     new d54b8754fd gnu: python-jupyter-core: Update to 4.10.0.
     new f30bdda88f gnu: python-jupyter-client: Update to 7.2.2.
     new 53e179c752 gnu: python-ipykernel: Update to 6.13.0.
     new 8194b36ddf gnu: Add python-pytest-tornado.
     new 0f446f1bc4 gnu: python-ipyparallel: Update to 8.2.1.
     new abb7617f20 gnu: python-anyio: Replace python-pytest-trio with 
python-trio.
     new 4bc0d5300b gnu: python-nbclient: Update to 0.6.0.
     new 10d69f20be gnu: python-bleach: Update to 5.0.0.
     new 9dd2e1bb92 gnu: Add texlive-unicode-math.
     new 15d4664f87 gnu: Add texlive-lm-math.
     new 724731de4c gnu: python-nbconvert: Update to 6.5.0.
     new 7d79d30e3a gnu: Add python-jupyter-server-mathjax.
     new d72c53fa43 gnu: python-nbval: Fix build.
     new 1e76c82ca6 gnu: python-send2trash: Update to 1.8.0 and update home 
page.
     new 73728b3942 gnu: python-notebook: Update to 6.4.10.
     new b6021d38ab gnu: Add python-nbdime.
     new 7e679ea7f7 gnu: Add python-docrepr.
     new efb791ba4f gnu: python-sphinx: Propagate TexLive dependencies.
     new 6c7834f46a gnu: Add python-pep621.
     new 28b602d0f6 gnu: Add python-sphinx-theme-builder.
     new d09edfec5f gnu: Add python-sphinx-sitemap.
     new cea6ff3d80 gnu: texlive-fontspec: Add missing propagated inputs.
     new 1ee15c8d68 gnu: texlive-polyglossia: Rename and fix package.
     new 75646d51c2 gnu: Add texlive-cbfonts-fd.
     new ee96537d0c gnu: Add texlive-cbfonts.
     new 8cdad3484c download: Add a mirror for CTAN.
     new e2c5700032 gnu: texlive-latex-geometry: Propagate 
texlive-latex-graphics.
     new cf44f00b5b gnu: Add texlive-cm-lgc.
     new 5fdae311a0 gnu: Add texlive-xindy.
     new 2576d9ffc4 gnu: python-ipython-documentation: Also build info and pdf 
targets.
     new 37caa64189 gnu: python-websockets: Update to 10.3 and enable tests.
     new 34c98f2cd3 gnu: Add python-strict-rfc3339.
     new ac4a73a1af gnu: Add python-rfc3339-validator.
     new 27c49acf06 gnu: Add python-openapi-schema-validator.
     new a81161c1a4 gnu: Add python-openapi-spec-validator.
     new c5d5c14101 gnu: Add python-cbor2.
     new f17611f3be gnu: python-httpcore: Update to 0.14.7 and enable tests.
     new b9fc478192 gnu: Add python-httpcore-bootstrap.
     new ef370c8501 gnu: Add python-httpx-bootstrap.
     new b4c4c2f82e gnu: python-httpx: Update to 0.22.0.
     new 634a798f51 gnu: python-uvicorn: Update to 0.17.6.
     new 1f5f4cc1a2 gnu: Add python-socksio.
     new 72d292eac0 gnu: python-sqlalchemy: Run tests in parallel via xdist.
     new df95872d10 gnu: python-sqlalchemy: Update to 1.4.35.
     new 0d58503970 gnu: Add python-pecan.
     new eba0784937 gnu: Add python-aioredis.
     new a64ea1f2d3 gnu: python-fakeredis: Update to 1.7.1.
     new e5d3408022 gnu: python-falcon: Update to 3.1.0.
     new ea754c74d3 gnu: Add python-dictpath.
     new 3f9eafbedd gnu: Add python-openapi-core.
     new 1a564cf147 gnu: Add python-jupyterlab-server.
     new bfe7f40650 gnu: python-hypothesis-6.23: Update to 6.43.3.
     new 411cd4345f gnu: python-numpy: Update to 1.21.6 and parallelize 
build/tests.
     new 152e45ef4d gnu: python-llvmlite: Update to 0.38.0.
     new feee911366 gnu: python-numba: Update to 0.55.1.
     new 8b390a8750 gnu: python-pandas: Build and run tests in parallel.
     new c359a4fabb gnu: python-pandas: Update to 1.4.2.
     new 1d1f44b709 gnu: python-scikit-learn: Parallelize build and test suite.
     new 06b0512260 gnu: python-pynndescent: Update to 0.5.6.
     new 34106c85d8 gnu: python-umap-learn: Update to 0.5.3.
     new 5f3457ccbb gnu: python-jupyter-server: Update to 1.16.0.
     new 5fcd6aefe9 gnu: python-voila: Update to 0.3.5.
     new 2c30237809 gnu: python-sparqlwrapper: Update to 2.0.0.
     new 7fc8e9ea90 gnu: python-sparqlkernel: Use gexps and fix inputs.
     new 1178fdee3b gnu: python-jupyter-protocol: Update to 0.2.0.
     new bf17d08256 gnu: python-jupyter-kernel-mgmt: Update to 0.5.1 and 
disable tests.
     new d9bb301460 gnu: xeus: Update to 2.4.1.
     new f2dfeef931 gnu: python-types-dataclasses: Fix typo.
     new fa3f7073a9 gnu: python-cmarkgfm: Update to 0.8.0.
     new ef4473051e gnu: python-readme-renderer: Update to 34.0.
     new d95db23cb1 gnu: mbed-tools: Update to 7.53.0 and relax click version 
requirement.
     new 046e5f0d04 gnu: conan: Update to 1.47.0 and relax PyYAML requirement.
     new 1f88242992 gnu: python-parse-type: Update to 0.6.0, fixing build.
     new d153caabac gnu: Add python-bson.
     new 8f3eb93cb0 gnu: python-can: Update to 4.0.0.
     new e8dc6ec5d8 gnu: python-amqp: Update to 5.1.1 and enable tests.
     new daf2b25755 gnu: python-kombu: Update to 5.2.4.
     new f35d65707c gnu: python-celery: Update to 5.2.6 and enable tests.
     new 2380d68227 gnu: Add python-argparse-addons.
     new 54f67e382e gnu: python-bitstruct: Update to 8.14.0.
     new 10ea06342a gnu: Add python-toolrack.
     new d45727f4e4 gnu: sshoot: Update to 1.5.1.
     new abca2b8047 gnu: python-multipart: Fix build with PyYAML 6.
     new 9152574009 gnu: Add python-mergedeep.
     new e051e00fef gnu: Add python-pyyaml-env-tag.
     new 03f26438e0 gnu: python-ghp-import: Update to 2.0.2.
     new c507802903 gnu: Add python-mdx-gh-links.
     new 4fe4943ba6 gnu: python-mkdocs: Update to 1.3.0.
     new 1341779f84 gnu: Add python-crccheck.
     new bb22c1ba5d gnu: python-cantools: Update to 37.0.7.
     new ece8e75902 gnu: python-locust: Update to 2.8.6.
     new 571713526c gnu: Remove python2-jmespath.
     new 3ddeaf90a6 gnu: python-croniter: Update to 1.3.4.
     new fa84f9bce9 gnu: python-miio: Update to 0.5.11.
     new 213696b061 gnu: Remove python-orator due to being broken and 
unmaintained.
     new e7b0d63e32 gnu: Add python-pydyf.
     new 84943a4e0e gnu: weasyprint: Update to 54.3.
     new 1dc1da973c gnu: seed: Use webkitgtk-with-libsoup2.
     new 9ca7d9f82d gnu: markets: Add python-wrapper to fix build.
     new e96c89b2c6 gnu: libgrss: Use libsoup-minimal-2 to fix build.
     new cc9feb754b gnu: setzer: Add python-wrapper to fix build.
     new faa49ec88d gnu: emacsy: Use webkitgtk-with-libsoup2.
     new 075dbc8734 gnu: python-keyring: Fix test suite.
     new 70bb54c8a2 gnu: Remove python2-keyring.
     new cecf195347 gnu: python-pingouin: Update to 0.5.1.
     new dff469209e gnu: python-flask-wtf: Update to 1.0.1.
     new 7d882da0eb gnu: python-flask-login: Update to 0.6.0.
     new e56ff45600 snippets: Add a 'remove' snippet.
     new ab36b88b1a gnu: python2-sqlalchemy: Skip a failing test.
     new 418630a63c gnu: dynaconf: Fix build following python-click upgrade.
     new a7e5a116fd gnu: python-numpydoc: Update to 1.2.1.
     new bb7b6ac13e gnu: python-sphinx: Update to 4.5.0.
     new c2a77beb1a gnu: python-pydata-sphinx-theme: Update to 0.7.2.
     new 9812a44f86 gnu: python-sphinx-copybutton: Update to 0.5.0.
     new 80ec843bf4 gnu: python-sphinx-click: Update to 4.0.3 and enable tests.
     new 936e335ac2 gnu: python-sphinxcontrib-websupport: Update to 1.2.4.
     new ab26bfd4d9 gnu: python-sphinxcontrib-programoutput: Update to 0.17 and 
enable tests.
     new badd61bed2 gnu: python-sphinx-argparse: Update to 0.3.1.
     new ea20078ccb gnu: python-sphinx-cloud-sptheme: Update to 1.10.1 [still 
broken].
     new 50b620f119 gnu: Add python-beartype.
     new 4d62953573 gnu: Add python-nptyping.
     new 0efccc8f18 gnu: python-sphinx-autodoc-typehints: Update to 1.18.1.
     new 01360c8b02 gnu: python-sphinxext-opengraph: Update to 0.6.3.
     new c16f282d56 gnu: python-sphinx-rtd-theme: Update to 1.0.0.
     new b60ca1f3b8 gnu: python-numpy-documentation: Overhaul package 
definition.
     new dfe81d0f81 gnu: Add python-ipdb.
     new 09fccde9c0 gnu: python-pudb: Update to 2022.1.1 and rename from pudb.
     new 9fd911eb9b gnu: Add python-mpl-sphinx-theme.
     new b3a77978c9 gnu: Add texlive-underscore.
     new 44256e57cc gnu: python-matplotlib-documentation: Fix build.
     new e3bb211c23 gnu: python-qtpy: Update to 2.0.1.
     new dd50817dd6 gnu: python-qtconsole: Update to 5.3.0.
     new f2ab6b04a4 gnu: python-pygments: Update to 2.12.0.
     new 1fd6bcfba7 gnu: python-matplotlib: Update to 3.5.2.
     new ba4ed74f9e gnu: python-pytest-sanic: Update to 1.9.1.
     new 1a0c253b93 gnu: python-multidict: Update to 5.2.0.
     new f6b001be16 gnu: Add python-sanic-routing.
     new 207065aa6e gnu: Add python-sanic-bootstrap.
     new 7acd012230 gnu: Add python-sanic-testing.
     new 93baba6475 gnu: python-sanic: Update to 21.12.1.

The 242 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .../text-mode/guix-commit-message-remove-package   |   13 +
 gnu/local.mk                                       |    4 +
 gnu/packages/android.scm                           |   22 +-
 gnu/packages/benchmark.scm                         |   24 +-
 gnu/packages/c.scm                                 |   32 +
 gnu/packages/check.scm                             |  258 +-
 gnu/packages/databases.scm                         |  124 +-
 gnu/packages/documentation.scm                     |   57 +
 gnu/packages/embedded.scm                          |   10 +-
 gnu/packages/fonts.scm                             |   91 +
 gnu/packages/fontutils.scm                         |  767 ++++-
 gnu/packages/gnome-xyz.scm                         |    2 +
 gnu/packages/gnome.scm                             |    7 +-
 gnu/packages/graphics.scm                          |  135 +
 gnu/packages/guile-xyz.scm                         |   10 +-
 gnu/packages/java.scm                              |   35 +-
 gnu/packages/jupyter.scm                           |  329 +-
 gnu/packages/llvm.scm                              |    6 +-
 gnu/packages/machine-learning.scm                  |   77 +-
 gnu/packages/markup.scm                            |    4 +-
 gnu/packages/matrix.scm                            |    2 +-
 gnu/packages/package-management.scm                |   12 +-
 .../patches/python-debugpy-unbundle-pydevd.patch   |  254 ++
 .../python-ipython-documentation-chars.patch       |   18 +
 .../python-ipython-documentation-repro.patch       |   25 +
 .../patches/python-mypy-use-sys-path.patch         |  130 +
 gnu/packages/pdf.scm                               |  130 +-
 gnu/packages/python-check.scm                      |  164 +-
 gnu/packages/python-crypto.scm                     |   30 +-
 gnu/packages/python-science.scm                    |  172 +-
 gnu/packages/python-web.scm                        |  601 +++-
 gnu/packages/python-xyz.scm                        | 3526 +++++++++++++-------
 gnu/packages/qt.scm                                |    7 +-
 gnu/packages/rdf.scm                               |   13 +-
 gnu/packages/sphinx.scm                            |  302 +-
 gnu/packages/tex.scm                               |  744 ++++-
 gnu/packages/version-control.scm                   |   11 +-
 gnu/packages/vpn.scm                               |   20 +-
 gnu/packages/xml.scm                               |   30 +
 guix/download.scm                                  |    5 +
 40 files changed, 6415 insertions(+), 1788 deletions(-)
 create mode 100644 etc/snippets/text-mode/guix-commit-message-remove-package
 create mode 100644 gnu/packages/patches/python-debugpy-unbundle-pydevd.patch
 create mode 100644 
gnu/packages/patches/python-ipython-documentation-chars.patch
 create mode 100644 
gnu/packages/patches/python-ipython-documentation-repro.patch
 create mode 100644 gnu/packages/patches/python-mypy-use-sys-path.patch