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branch master updated: gnu: Add r-agimicrorna.
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guix-commits |
Subject: |
branch master updated: gnu: Add r-agimicrorna. |
Date: |
Mon, 02 May 2022 09:26:21 -0400 |
This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new 7494f4b4ab gnu: Add r-agimicrorna.
7494f4b4ab is described below
commit 7494f4b4ab94504ac1c8ac71d53ab6ab9c552da1
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Mon May 2 11:37:34 2022 +0200
gnu: Add r-agimicrorna.
* gnu/packages/bioconductor.scm (r-agimicrorna): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++
1 file changed, 30 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 2db0ab3752..80cf28c954 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1944,6 +1944,36 @@ time drift and quantifies level mass spectral peaks from
@dfn{first stage of
mass spectrometry} (MS1) data.")
(license license:artistic2.0)))
+(define-public r-agimicrorna
+ (package
+ (name "r-agimicrorna")
+ (version "2.46.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "AgiMicroRna" version))
+ (sha256
+ (base32
+ "0jic89gyphbv7jzlfgm9bh1aq48lp86rq6hr34gsg9z0pa1192xa"))))
+ (properties `((upstream-name . "AgiMicroRna")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-affy
+ r-affycoretools
+ r-biobase
+ r-limma
+ r-preprocesscore))
+ (home-page "https://git.bioconductor.org/packages/AgiMicroRna")
+ (synopsis
+ "Processing and differential expression analysis of Agilent microRNA
chips")
+ (description
+ "@code{AgiMicroRna} provides useful functionality for the processing,
+quality assessment and differential expression analysis of Agilent microRNA
+array data. The package uses a limma-like structure to generate the processed
+data in order to make statistical inferences about differential expression
+using the linear model features implemented in limma. Standard Bioconductor
+objects are used so that other packages could be used as well.")
+ (license license:gpl3)))
+
(define-public r-aneufinder
(package
(name "r-aneufinder")
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