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branch master updated: gnu: python-velocyto: Set cache directory for Num
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guix-commits |
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branch master updated: gnu: python-velocyto: Set cache directory for Numba. |
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Thu, 31 Mar 2022 10:02:47 -0400 |
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rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new 05e68f31ba gnu: python-velocyto: Set cache directory for Numba.
05e68f31ba is described below
commit 05e68f31ba88586ba6b958b1a76f613f64c0c9cc
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Mar 31 16:01:27 2022 +0200
gnu: python-velocyto: Set cache directory for Numba.
* gnu/packages/bioinformatics.scm (python-velocyto)[arguments]: Add phase
'set-numba-cache-dir.
---
gnu/packages/bioinformatics.scm | 7 +++++++
1 file changed, 7 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index fd659b59f8..fd7d70c6b4 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -13519,6 +13519,13 @@ repeated areas between contigs.")
(snippet
'(for-each delete-file (find-files "." "\\.c")))))
(build-system python-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ ;; Numba needs a writable dir to cache functions.
+ (add-before 'check 'set-numba-cache-dir
+ (lambda _
+ (setenv "NUMBA_CACHE_DIR" "/tmp"))))))
(native-inputs
(list python-joblib))
(propagated-inputs
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