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branch wip-r updated: gnu: r-gdsfmt: Adjust bad substitution.
From: |
guix-commits |
Subject: |
branch wip-r updated: gnu: r-gdsfmt: Adjust bad substitution. |
Date: |
Wed, 29 Sep 2021 18:11:50 -0400 |
This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch wip-r
in repository guix.
The following commit(s) were added to refs/heads/wip-r by this push:
new eb0c814 gnu: r-gdsfmt: Adjust bad substitution.
eb0c814 is described below
commit eb0c81469d68dd4b8a7d7b91d6ab3d345f11f859
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Sep 30 00:10:33 2021 +0200
gnu: r-gdsfmt: Adjust bad substitution.
* gnu/packages/bioconductor.scm (r-gdsfmt)[source]: Include
beginning-of-line
anchor in substitution regular expression.
---
gnu/packages/bioconductor.scm | 5 ++---
1 file changed, 2 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e5777d..4cbffac 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -10548,7 +10548,7 @@ metrics, with methods for objects produced by the
@code{methylumi} and
(substitute* "src/Makevars"
(("all: \\$\\(SHLIB\\)") "all:")
(("\\$\\(SHLIB\\): liblzma.a") "")
- (("(ZLIB|LZ4)/.*") "")
+ (("^ (ZLIB|LZ4)/.*") "")
(("CoreArray/dVLIntGDS.cpp.*")
"CoreArray/dVLIntGDS.cpp")
(("CoreArray/dVLIntGDS.o.*")
@@ -10557,8 +10557,7 @@ metrics, with methods for objects produced by the
@code{methylumi} and
"PKG_LIBS = -llz4"))
(substitute* "src/CoreArray/dStream.h"
(("include \"../(ZLIB|LZ4|XZ/api)/(.*)\"" _ _ header)
- (string-append "include <" header ">")))
- #t))))
+ (string-append "include <" header ">")))))))
(properties `((upstream-name . "gdsfmt")))
(build-system r-build-system)
(inputs
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