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branch master updated: gnu: Add python-upsetplot.
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guix-commits |
Subject: |
branch master updated: gnu: Add python-upsetplot. |
Date: |
Fri, 12 Mar 2021 08:04:26 -0500 |
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rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new 456355c gnu: Add python-upsetplot.
456355c is described below
commit 456355c2538be4288b407ace7d0d769fb16a2076
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Mar 12 13:56:12 2021 +0100
gnu: Add python-upsetplot.
* gnu/packages/python-science.scm (python-upsetplot): New variable.
---
gnu/packages/python-science.scm | 37 +++++++++++++++++++++++++++++++++++++
1 file changed, 37 insertions(+)
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
index 5221f41..391d37d 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -557,3 +557,40 @@ Python's native complex data types is also supported.")
"This is a Python package to compute statistical test and add statistical
annotations on an existing boxplots and barplots generated by seaborn.")
(license license:expat)))
+
+(define-public python-upsetplot
+ (package
+ (name "python-upsetplot")
+ (version "0.4.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "UpSetPlot" version))
+ (sha256
+ (base32
+ "0kwljcmsvrxm33y3ssham2bwv4a5m31mv96y9h18va0cv7s3mqn1"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'fix-versioning
+ (lambda _
+ (substitute* "setup.py"
+ (("pytest-cov<2.6") "pytest-cov"))))
+ (replace 'check
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (add-installed-pythonpath inputs outputs)
+ (invoke "pytest" "-v" "--doctest-modules"))))))
+ (propagated-inputs
+ `(("python-matplotlib" ,python-matplotlib)
+ ("python-pandas" ,python-pandas)))
+ (native-inputs
+ `(("python-pytest-runner" ,python-pytest-runner)
+ ("python-pytest-cov" ,python-pytest-cov)))
+ (home-page "https://upsetplot.readthedocs.io")
+ (synopsis "Draw UpSet plots with Pandas and Matplotlib")
+ (description
+ "This is a Python implementation of UpSet plots by Lex et al.
+UpSet plots are used to visualize set overlaps; like Venn diagrams but more
+readable.")
+ (license license:bsd-3)))
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