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01/40: Merge branch 'ungrafting' into staging
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From: |
guix-commits |
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Subject: |
01/40: Merge branch 'ungrafting' into staging |
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Date: |
Sun, 13 Dec 2020 15:46:11 -0500 (EST) |
mbakke pushed a commit to branch staging
in repository guix.
commit d13ed52da216ece35af8e4f4ae413eb05912794b
Merge: bdfdb9d a7737f0
Author: Marius Bakke <marius@gnu.org>
AuthorDate: Sun Dec 13 20:50:50 2020 +0100
Merge branch 'ungrafting' into staging
Makefile.am | 1 +
config-daemon.ac | 3 +-
configure.ac | 12 +-
doc/guix.texi | 80 +-
etc/guix-daemon.cil.in | 4 +-
etc/news.scm | 26 +-
gnu/build/linux-container.scm | 2 +-
gnu/installer.scm | 7 +
gnu/installer/newt.scm | 5 +
gnu/installer/newt/substitutes.scm | 43 +
gnu/installer/proxy.scm | 6 +-
gnu/installer/record.scm | 3 +
gnu/installer/{proxy.scm => substitutes.scm} | 20 +-
gnu/installer/utils.scm | 11 +-
gnu/local.mk | 15 +-
gnu/packages/admin.scm | 19 +-
gnu/packages/audio.scm | 4 +-
gnu/packages/autotools.scm | 35 +-
gnu/packages/aux-files/guile-launcher.c | 46 +-
gnu/packages/backup.scm | 44 -
gnu/packages/benchmark.scm | 4 +-
gnu/packages/bioconductor.scm | 1383 +++++++++++++-------
gnu/packages/bioinformatics.scm | 499 ++++---
gnu/packages/busybox.scm | 16 +-
gnu/packages/ci.scm | 8 +-
gnu/packages/cran.scm | 939 ++++++++++---
gnu/packages/crates-graphics.scm | 37 +-
gnu/packages/crates-io.scm | 477 ++++++-
gnu/packages/cups.scm | 7 +-
gnu/packages/curl.scm | 58 +-
gnu/packages/cybersecurity.scm | 5 +-
gnu/packages/databases.scm | 12 +
gnu/packages/dictionaries.scm | 4 +-
gnu/packages/diffoscope.scm | 4 +-
gnu/packages/dns.scm | 11 +-
gnu/packages/ebook.scm | 28 +
gnu/packages/emacs-xyz.scm | 433 ++++--
gnu/packages/emulators.scm | 2 +-
gnu/packages/engineering.scm | 35 +-
gnu/packages/fcitx5.scm | 450 +++++++
gnu/packages/finance.scm | 74 +-
gnu/packages/fontutils.scm | 73 +-
gnu/packages/game-development.scm | 35 +-
gnu/packages/games.scm | 4 +-
gnu/packages/ghostscript.scm | 4 +-
gnu/packages/gimp.scm | 95 +-
gnu/packages/gl.scm | 61 +
gnu/packages/glib.scm | 29 +-
gnu/packages/gnome.scm | 4 +-
gnu/packages/gnucash.scm | 18 +-
gnu/packages/gnuzilla.scm | 4 +-
gnu/packages/golang.scm | 256 +++-
gnu/packages/gtk.scm | 13 +-
gnu/packages/guile-xyz.scm | 85 +-
gnu/packages/haskell-crypto.scm | 36 +
gnu/packages/haskell-web.scm | 250 +++-
gnu/packages/image-viewers.scm | 4 +-
gnu/packages/image.scm | 80 +-
gnu/packages/javascript.scm | 21 +
gnu/packages/kde-frameworks.scm | 2 +-
gnu/packages/kde-internet.scm | 4 +-
gnu/packages/kde-multimedia.scm | 4 +-
gnu/packages/kde-pim.scm | 30 +-
gnu/packages/kde-plasma.scm | 4 +-
gnu/packages/kde.scm | 53 +-
gnu/packages/linux.scm | 44 +-
gnu/packages/lisp-xyz.scm | 136 +-
gnu/packages/machine-learning.scm | 4 +-
gnu/packages/mail.scm | 19 +-
gnu/packages/maths.scm | 64 +-
gnu/packages/matrix.scm | 4 +-
gnu/packages/monitoring.scm | 4 +-
gnu/packages/networking.scm | 13 +
gnu/packages/nfs.scm | 5 +-
gnu/packages/node.scm | 22 +-
gnu/packages/ntp.scm | 4 +-
gnu/packages/ocaml.scm | 16 +-
gnu/packages/openldap.scm | 49 +-
gnu/packages/package-management.scm | 22 +-
gnu/packages/password-utils.scm | 8 +-
.../busybox-1.31.1-fix-build-with-glibc-2.31.patch | 68 -
.../patches/ghostscript-CVE-2020-15900.patch | 36 +
.../patches/ghostscript-freetype-compat.patch | 35 +
gnu/packages/patches/hplip-fix-bug-1898438.patch | 19 -
.../knot-resolver-fix-map-command-on-32-bit.patch | 146 ---
gnu/packages/patches/libssh2-CVE-2019-17498.patch | 126 ++
.../patches/minimap2-aarch64-support.patch | 52 +
gnu/packages/patches/pam-mount-luks2-support.patch | 51 -
gnu/packages/patches/pciutils-hurd-fix.patch | 23 +
gnu/packages/patches/python-CVE-2020-26116.patch | 47 +
.../patches/renpy-use-system-fribidi.patch | 52 +
.../patches/sbcl-geco-fix-organism-class.patch | 13 -
gnu/packages/pciutils.scm | 15 +-
gnu/packages/python-web.scm | 4 +-
gnu/packages/python-xyz.scm | 38 +-
gnu/packages/python.scm | 1 +
gnu/packages/ruby.scm | 4 +-
gnu/packages/ssh.scm | 5 +-
gnu/packages/statistics.scm | 92 +-
gnu/packages/text-editors.scm | 41 +
gnu/packages/tls.scm | 76 +-
gnu/packages/version-control.scm | 62 +
gnu/packages/video.scm | 21 +-
gnu/packages/vim.scm | 36 +-
gnu/packages/virtualization.scm | 4 +-
gnu/packages/visidata.scm | 4 +-
gnu/packages/vpn.scm | 33 +-
gnu/packages/web-browsers.scm | 8 +-
gnu/packages/web.scm | 206 ++-
gnu/packages/wm.scm | 71 +
gnu/packages/xdisorg.scm | 41 +
gnu/packages/xfce.scm | 13 +-
gnu/packages/xorg.scm | 20 +-
gnu/services/audio.scm | 6 +-
gnu/services/avahi.scm | 4 +-
gnu/services/base.scm | 36 +-
gnu/services/cuirass.scm | 4 +
gnu/services/monitoring.scm | 81 +-
gnu/services/science.scm | 18 +
gnu/services/security-token.scm | 3 +-
gnu/services/virtualization.scm | 15 +-
gnu/system/install.scm | 6 +
guix/avahi.scm | 9 +-
guix/build-system/r.scm | 2 +-
guix/ci.scm | 10 +
guix/download.scm | 21 +-
guix/glob.scm | 15 +
guix/http-client.scm | 12 +-
guix/import/cran.scm | 10 +-
guix/import/opam.scm | 58 +-
guix/import/utils.scm | 4 +-
guix/profiles.scm | 52 +-
guix/progress.scm | 8 +-
guix/scripts/import/cran.scm | 9 +-
guix/scripts/import/opam.scm | 10 +-
guix/scripts/substitute.scm | 253 ++--
guix/self.scm | 26 +-
guix/store/database.scm | 2 -
m4/guix.m4 | 4 +-
nix/libstore/build.cc | 173 +--
nix/libstore/local-store.cc | 170 +--
nix/libstore/local-store.hh | 25 +-
nix/libutil/util.cc | 6 +-
nix/libutil/util.hh | 7 +-
po/guix/POTFILES.in | 1 +
scripts/guix.in | 2 +-
tests/glob.scm | 8 +-
tests/lint.scm | 33 +-
tests/opam.scm | 67 +-
tests/profiles.scm | 38 +
tests/substitute.scm | 98 +-
151 files changed, 6645 insertions(+), 2579 deletions(-)
- branch staging updated (bdfdb9d -> a73302e), guix-commits, 2020/12/13
- 01/40: Merge branch 'ungrafting' into staging,
guix-commits <=
- 02/40: gnu: linux-pam: Update to 1.5.1., guix-commits, 2020/12/13
- 03/40: gnu: nss, nss-certs: Update to 3.59., guix-commits, 2020/12/13
- 06/40: gnu: Remove gdb@9., guix-commits, 2020/12/13
- 04/40: gnu: MariaDB: Update to 10.5.8., guix-commits, 2020/12/13
- 05/40: gnu: Qt: Update to 5.15.2., guix-commits, 2020/12/13
- 09/40: gnu: ImageMagick: Update to 6.9.11-48., guix-commits, 2020/12/13
- 13/40: gnu: python-cryptography: Update to 3.3.1., guix-commits, 2020/12/13
- 12/40: gnu: python-iso8601: Update to 0.1.13., guix-commits, 2020/12/13
- 08/40: gnu: libva: Update to 2.10.0., guix-commits, 2020/12/13
- 16/40: gnu: python-babel: Update to 2.9.0., guix-commits, 2020/12/13