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293/323: gnu: Add r-sparsematrixstats.
From: |
guix-commits |
Subject: |
293/323: gnu: Add r-sparsematrixstats. |
Date: |
Mon, 7 Dec 2020 15:14:20 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit f63e02034babeafcfdad7d2c207de9ef29c7c964
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Nov 21 10:24:12 2020 +0100
gnu: Add r-sparsematrixstats.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): New variable.
---
gnu/packages/bioconductor.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 78ad278..bec37aa 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8917,6 +8917,34 @@ cell-specific biases, assignment of cell cycle phase,
and detection of highly
variable and significantly correlated genes.")
(license license:gpl3)))
+(define-public r-sparsematrixstats
+ (package
+ (name "r-sparsematrixstats")
+ (version "1.2.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "sparseMatrixStats" version))
+ (sha256
+ (base32
+ "0d1idbda1pzhdam9m0i5rn0c6pl7gwv0v3mcrv4wi5760v9qd5qh"))))
+ (properties
+ `((upstream-name . "sparseMatrixStats")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-matrix" ,r-matrix)
+ ("r-matrixgenerics" ,r-matrixgenerics)
+ ("r-matrixstats" ,r-matrixstats)
+ ("r-rcpp" ,r-rcpp)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "https://bioconductor.org/packages/sparseMatrixStats/")
+ (synopsis "Summary statistics for rows and columns of sparse matrices")
+ (description
+ "This package provides high performance functions for row and column
+operations on sparse matrices. Currently, the optimizations are limited to
+data in the column sparse format.")
+ (license license:expat)))
+
(define-public r-delayedmatrixstats
(package
(name "r-delayedmatrixstats")
- 277/323: gnu: r-gage: Update to 2.40.0., (continued)
- 277/323: gnu: r-gage: Update to 2.40.0., guix-commits, 2020/12/07
- 130/323: gnu: r-annotatr: Update to 1.16.0., guix-commits, 2020/12/07
- 233/323: gnu: r-annotationdbi: Update to 1.52.0., guix-commits, 2020/12/07
- 235/323: gnu: r-biocparallel: Update to 1.24.1., guix-commits, 2020/12/07
- 238/323: gnu: r-summarizedexperiment: Update to 1.20.0., guix-commits, 2020/12/07
- 241/323: gnu: r-rtracklayer: Update to 1.50.0., guix-commits, 2020/12/07
- 242/323: gnu: r-genomicfeatures: Update to 1.42.1., guix-commits, 2020/12/07
- 255/323: gnu: r-annotationfilter: Update to 1.14.0., guix-commits, 2020/12/07
- 276/323: gnu: r-keggrest: Update to 1.30.0., guix-commits, 2020/12/07
- 279/323: gnu: r-complexheatmap: Update to 2.6.2., guix-commits, 2020/12/07
- 293/323: gnu: Add r-sparsematrixstats.,
guix-commits <=
- 294/323: gnu: r-genomationdata: Update to 1.22.0., guix-commits, 2020/12/07
- 296/323: gnu: r-genomicinteractions: Update to 1.24.0., guix-commits, 2020/12/07
- 299/323: gnu: r-singlecellexperiment: Update to 1.12.0., guix-commits, 2020/12/07
- 301/323: gnu: r-rhdf5: Update to 2.34.0., guix-commits, 2020/12/07
- 303/323: gnu: Add r-scuttle., guix-commits, 2020/12/07
- 40/323: gnu: r-glimma: Update to 2.0.0., guix-commits, 2020/12/07
- 49/323: gnu: r-chipexoqual: Update to 1.14.0., guix-commits, 2020/12/07
- 53/323: gnu: r-karyoploter: Update to 1.16.0., guix-commits, 2020/12/07
- 66/323: gnu: r-ioniser: Update to 2.14.0., guix-commits, 2020/12/07
- 55/323: gnu: r-ihw: Update to 1.18.0., guix-commits, 2020/12/07