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291/318: gnu: Add r-matrixgenerics.
From: |
guix-commits |
Subject: |
291/318: gnu: Add r-matrixgenerics. |
Date: |
Fri, 20 Nov 2020 08:41:13 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit 8ba195708a933b662815c2e43028c4b77b4808eb
Author: Roel Janssen <roel@gnu.org>
AuthorDate: Wed Nov 18 15:51:14 2020 +0100
gnu: Add r-matrixgenerics.
* gnu/packages/bioconductor.scm (r-matrixgenerics): New variable.
---
gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3bf1533..4ea94a3 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1872,6 +1872,33 @@ for finding the peaks with bi-directional promoters with
summary statistics
enrichedGO (addGeneIDs).")
(license license:gpl2+)))
+(define-public r-matrixgenerics
+ (package
+ (name "r-matrixgenerics")
+ (version "1.2.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "MatrixGenerics" version))
+ (sha256
+ (base32
+ "1a3sw79185d6rld3wlrynkzcbp754a7jkracrmvn0ra964ia8zvc"))))
+ (properties
+ `((upstream-name . "MatrixGenerics")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-matrixstats" ,r-matrixstats)))
+ (home-page "https://bioconductor.org/packages/MatrixGenerics")
+ (synopsis "S4 generic summary statistic functions for matrix-like objects")
+ (description
+ "This package provides S4 generic functions modeled after the
+@code{matrixStats} API for alternative matrix implementations. Packages with
+alternative matrix implementation can depend on this package and implement the
+generic functions that are defined here for a useful set of row and column
+summary statistics. Other package developers can import this package and
+handle a different matrix implementations without worrying about
+incompatibilities.")
+ (license license:artistic2.0)))
+
(define-public r-marray
(package
(name "r-marray")
- 260/318: gnu: r-affyio: Update to 1.60.0., (continued)
- 260/318: gnu: r-affyio: Update to 1.60.0., guix-commits, 2020/11/20
- 267/318: gnu: r-aroma-light: Update to 3.20.0., guix-commits, 2020/11/20
- 264/318: gnu: r-pcamethods: Update to 1.82.0., guix-commits, 2020/11/20
- 262/318: gnu: r-vsn: Update to 3.58.0., guix-commits, 2020/11/20
- 266/318: gnu: r-msnid: Update to 1.24.0., guix-commits, 2020/11/20
- 276/318: gnu: r-dirichletmultinomial: Update to 1.32.0., guix-commits, 2020/11/20
- 283/318: gnu: r-erma: Update to 1.6.0., guix-commits, 2020/11/20
- 284/318: gnu: r-ldblock: Update to 1.20.0., guix-commits, 2020/11/20
- 289/318: import: cran: Update the Bioconductor version to 3.12., guix-commits, 2020/11/20
- 290/318: gnu: Add r-ggalluvial., guix-commits, 2020/11/20
- 291/318: gnu: Add r-matrixgenerics.,
guix-commits <=
- 292/318: gnu: r-delayedarray: Fix build., guix-commits, 2020/11/20
- 294/318: gnu: r-hpar: Update to 1.32.1., guix-commits, 2020/11/20
- 296/318: gnu: r-genomicfeatures: Update to 1.42.1., guix-commits, 2020/11/20
- 298/318: gnu: r-mutationalpatterns: Update to 3.0.1., guix-commits, 2020/11/20
- 299/318: gnu: r-complexheatmap: Update to 2.6.2., guix-commits, 2020/11/20
- 145/318: gnu: r-cytoml: Update to 2.2.0., guix-commits, 2020/11/20
- 148/318: gnu: r-depecher: Update to 1.6.0., guix-commits, 2020/11/20
- 156/318: gnu: r-seqbias: Update to 1.38.0., guix-commits, 2020/11/20
- 157/318: gnu: r-reqon: Update to 1.36.0., guix-commits, 2020/11/20
- 158/318: gnu: r-wavcluster: Update to 2.24.0., guix-commits, 2020/11/20