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06/10: gnu: julia: Update to 1.5.2.
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From: |
guix-commits |
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Subject: |
06/10: gnu: julia: Update to 1.5.2. |
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Date: |
Fri, 16 Oct 2020 09:03:22 -0400 (EDT) |
civodul pushed a commit to branch master
in repository guix.
commit 9a4c83bdb61d046617e87ad9b4c0e1d6b55b1810
Author: Tim Howes <timhowes@lavabit.com>
AuthorDate: Wed Oct 14 20:05:28 2020 -0700
gnu: julia: Update to 1.5.2.
* gnu/packages/julia.scm (libuv-julia): No change to libuv.version.
(julia-patch): Update to 1.5.2.
(llvm-julia)[inherit]: Update to use llvm-9.
[source]: Apply patches for llvm-9 from deps/llvm.mk.
(julia): Update to 1.5.2.
[source]: Remove substitutions for precompile.jl and cmdlineargs.jl.
Add a substitution for Dates/io tests. Set --depwarn=error for tests.
[arguments]: Set LLVM_VER=9.0.1.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
---
gnu/packages/julia.scm | 113 +++++++++++++++++++++----------------------------
1 file changed, 49 insertions(+), 64 deletions(-)
diff --git a/gnu/packages/julia.scm b/gnu/packages/julia.scm
index 78488a4..65fa726 100644
--- a/gnu/packages/julia.scm
+++ b/gnu/packages/julia.scm
@@ -2,6 +2,7 @@
;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016, 2020 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
+;;; Copyright © 2020 Tim Howes <timhowes@lavabit.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -53,7 +54,7 @@
(let ((commit "35b1504507a7a4168caae3d78db54d1121b121e1")
(revision "1"))
;; When upgrading Julia, also upgrade this. Get the commit from
- ;; https://github.com/JuliaLang/julia/blob/v1.4.1/deps/libuv.version
+ ;; https://github.com/JuliaLang/julia/blob/v1.5.2/deps/libuv.version
(package
(inherit libuv)
(name "libuv-julia")
@@ -103,7 +104,7 @@
"/deps/patches/" name ".patch"))
(define (julia-patch name sha)
- (let ((version "1.4.1"))
+ (let ((version "1.5.2"))
(origin (method url-fetch)
(uri (julia-patch-url version name))
(sha256 (base32 sha))
@@ -111,63 +112,52 @@
(define llvm-julia
(package
- (inherit llvm-8)
+ (inherit llvm-9)
(name "llvm-julia")
(source (origin
- (inherit (package-source llvm-8))
+ (inherit (package-source llvm-9))
;; Those patches are inside the Julia source repo.
;; They are _not_ Julia specific
(https://github.com/julialang/julia#llvm)
;; but they are required to build Julia.
;; Discussion:
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=919628
(patches
- (map (match-lambda
- ((name hash)
- (julia-patch name hash)))
- (list
- '("llvm-7.0-D44650"
-
"1h55kkmkiisfj6sk956if2bcj9s0v6n5czn8dxb870vp5nccj3ir")
- '("llvm-6.0-DISABLE_ABI_CHECKS"
-
"014fawd1ba7yckalypfld22zgic87x9nx3cim42zrwygywd36pyg")
- '("llvm-6.0-NVPTX-addrspaces"
-
"1qdi2zmrjsrj0h84zv2vyly2hjcn4f67mfy0s1q353g4v4jkscqc")
- '("llvm-D27629-AArch64-large_model_6.0.1"
-
"1qrshmlqvnasdyc158vfn3hnbigqph3lsq7acb9w8lwkpnnm2j4z")
- '("llvm8-D34078-vectorize-fdiv"
-
"19spqc3xsazn1xs9gpcgv9ldadfkv49rmc5khl7sf1dlmhgi4602")
- '("llvm7-D50010-VNCoercion-ni"
-
"18scg6aa036xa1508s7q93w9dvc5gp69fz6yl6fkh4yffw4gymw6")
- '("llvm-8.0-D50167-scev-umin"
-
"0g9w2x8yryjdkihnrf18x0yi5bi14c5p8wffda1w732dr5ckzk94")
- '("llvm-D57118-powerpc"
-
"0vxz5s0s9b625v1rv8lg1566yhxh1i91ydzmvy5s7njvzc7p19aw")
- '("llvm8-WASM-addrspaces"
-
"1176agj9hh7csdm2lnklb42zcdsb3q6lx9jiyp2shn4p2678y76q")
- '("llvm-exegesis-mingw"
-
"0ph1cj1j7arvf1xq2xcr7qf9g0cpdl14fincgr67vpi520zvd3vp")
- '("llvm-test-plugin-mingw"
-
"12z738cnahbf6n381im7i0hxp1m6k9hrnfjlmq9sac46nxly9gnj")
- '("llvm-8.0-D66401-mingw-reloc"
-
"15v3p5sznn979cfnd7gdn3nd701fd7xd5aks6lnj1mslvljlq3ls")
- '("llvm7-revert-D44485"
-
"0f59kq3p3mpwsbmskypbi4zn01l6ig0x7v2rjp08k2r8z8m6fa8n")
- '("llvm-8.0-D63688-wasm-isLocal"
-
"0i9wi5n63ip3802z6m7aj3p07hkqjlmp4vg4wq3xkf9f6w9rksab")
- '("llvm-8.0-D55758-tablegen-cond"
-
"1l08mg7qigravi7plsq3yzya80fljnp95n8faddr29wbr2qr0655")
- '("llvm-8.0-D59389-refactor-wmma"
-
"0rgrwk4xlwpk7yai2j7xadcfws93rmk2hhh44fysa88imvrbp478")
- '("llvm-8.0-D59393-mma-ptx63-fix"
-
"094jcsxbcx9fljj623mgmc0rjpk12s2rs0di0ck0hakzhr8mbv5n")
- '("llvm-8.0-D66657-codegen-degenerate"
-
"1n1ddx19h90bbpimdyd9dh8fsm6gb93xxyqm4ljkxa1k3cx2vm72")
- '("llvm-8.0-D71495-vectorize-freduce"
-
"1zff08wvji9lnpskk4b3p5zyjsy5hhy23ynxjqlj9dw7jvvfrf0p")
- '("llvm-8.0-D75072-SCEV-add-type"
-
"0amlyyndsc90ml2k6prdahf24q0j23nfmlbqf8gcqcxpl5sqq3i6")
- '("llvm-8.0-D65174-limit-merge-stores"
-
"1ls5114fhgip9rbqabqc16mi367ra0k75ngc1vyqqhq1ghm9x7y9"))))))
+ (map (match-lambda
+ ((name hash)
+ (julia-patch name hash)))
+ (list
+ '("llvm-D27629-AArch64-large_model_6.0.1"
+ "1qrshmlqvnasdyc158vfn3hnbigqph3lsq7acb9w8lwkpnnm2j4z")
+ '("llvm8-D34078-vectorize-fdiv"
+ "19spqc3xsazn1xs9gpcgv9ldadfkv49rmc5khl7sf1dlmhgi4602")
+ '("llvm-7.0-D44650"
+ "1h55kkmkiisfj6sk956if2bcj9s0v6n5czn8dxb870vp5nccj3ir")
+ '("llvm9-D50010-VNCoercion-ni"
+ "1s1d3sjsiq4vxg7ncy5cz56zgy5vcq6ls3iqaiqkvr23wyryqmdx")
+ '("llvm-exegesis-mingw"
+ "0ph1cj1j7arvf1xq2xcr7qf9g0cpdl14fincgr67vpi520zvd3vp")
+ '("llvm-test-plugin-mingw"
+ "12z738cnahbf6n381im7i0hxp1m6k9hrnfjlmq9sac46nxly9gnj")
+ '("llvm7-revert-D44485"
+ "0f59kq3p3mpwsbmskypbi4zn01l6ig0x7v2rjp08k2r8z8m6fa8n")
+ '("llvm-8.0-D66657-codegen-degenerate"
+ "1n1ddx19h90bbpimdyd9dh8fsm6gb93xxyqm4ljkxa1k3cx2vm72")
+ '("llvm-8.0-D71495-vectorize-freduce"
+ "1zff08wvji9lnpskk4b3p5zyjsy5hhy23ynxjqlj9dw7jvvfrf0p")
+ '("llvm-D75072-SCEV-add-type"
+ "029a3fywsm233vf48mscina24idd50dc75wr70lmimrhwnw27p0z")
+ '("llvm-9.0-D65174-limit-merge-stores"
+ "04bff1mnblfj9mxfdwr1qdnw3i3szmp60gnhxwas5y68qg33z6j0")
+ '("llvm9-D71443-PPC-MC-redef-symbol"
+ "1c93nv7rgc9jg5mqrnvv08xib1789qvlql94fwggh18mp3b9hbgy")
+ '("llvm-9.0-D78196"
+ "08a43hyg7yyqjq2vmfsmppf34xcz60wq6y9zw5fdyhw2h1mcnmns")
+ '("llvm-julia-tsan-custom-as"
+ "0awh40kf6lm4wn1nsjd1bmhfwq7rqj811szanp2xkpspykw9hg9s")
+ '("llvm-9.0-D85499"
+
"0vxlr35srvbvihlgrxq15v6dylp90vgi0qahj22j01jgqmdasjkm"))))
+ (patch-flags '("-p1"))))
(arguments
- (substitute-keyword-arguments (package-arguments llvm-8)
+ (substitute-keyword-arguments (package-arguments llvm-9)
((#:configure-flags flags)
`(list ;; Taken from NixOS. Only way I could get libLLVM-6.0.so
"-DCMAKE_BUILD_TYPE=Release"
@@ -231,7 +221,7 @@ libraries. It is also a bit like @code{ldd} and
@code{otool -L}.")
(define-public julia
(package
(name "julia")
- (version "1.4.1")
+ (version "1.5.2")
(source (origin
(method url-fetch)
(uri (string-append
@@ -239,7 +229,7 @@ libraries. It is also a bit like @code{ldd} and
@code{otool -L}.")
version "/julia-" version ".tar.gz"))
(sha256
(base32
- "030aza3qj5zcinxbrbqgi7p64q6klwq2bhwccraarx7l0hg9lw3i"))
+ "08wazf3f1lb2c2c5s700kyak8llfqwki8xlnqyrbwmwxjj801p2n"))
(patches
(search-patches "julia-SOURCE_DATE_EPOCH-mtime.patch"))))
(build-system gnu-build-system)
@@ -344,16 +334,6 @@ libraries. It is also a bit like @code{ldd} and
@code{otool -L}.")
"tests =
filter(e->!in(e,[\"backtrace\",\"exceptions\",\"precompile\",
\"client\",\"stacktraces\"]),
testnames)"))
- ;; precompile test is broken, fixed in
- ;; fed29f893544d1dc8f86444c65d632c68168d0f3
- (substitute* "test/precompile.jl"
- (("@test !isdefined\\(Base.Nothing.name.mt")
- "# @test !isdefined(Base.Nothing.name.mt"))
- ;; When HOME is not set, julia calls uv_os_homedir, which in
- ;; turns call getpwuid_r. Add the HOME env variable to the
- ;; external julia call to fix this
- (substitute* "test/cmdlineargs.jl"
- (("\"JULIA_PROJECT\"") "\"HOME\"=>\"/tmp\", \"JULIA_PROJECT\""))
;; Marking the test as broken as it's a known bug:
;; https://github.com/JuliaLang/julia/issues/32377
(substitute* "stdlib/REPL/test/replcompletions.jl"
@@ -361,11 +341,16 @@ libraries. It is also a bit like @code{ldd} and
@code{otool -L}.")
;; Dates has a similar bug:
;; https://github.com/JuliaLang/julia/issues/34655
(substitute* "stdlib/Dates/test/io.jl"
+ (("\"Dates.Date") "\"Date")
(("\"Dates.Time") "\"Time"))
;; Upstream bug I found when packaging
;; https://github.com/JuliaLang/julia/issues/35785
(substitute* "test/file.jl"
(("@test dirname\\(t\\) == d") "@test_broken dirname(t) == d"))
+ ;; Deprecation test fails with --depwarn=no
+ ;; https://github.com/JuliaLang/julia/issues/37673
+ (substitute* "test/Makefile"
+ (("./runtests.jl") "--depwarn=error ./runtests.jl"))
#t))
(add-after 'install 'make-wrapper
(lambda* (#:key inputs outputs #:allow-other-keys)
@@ -416,7 +401,7 @@ libraries. It is also a bit like @code{ldd} and
@code{otool -L}.")
(assoc-ref %build-inputs "utf8proc")
"/include")
"USE_SYSTEM_LLVM=1"
- "LLVM_VER=8.0.0"
+ "LLVM_VER=9.0.1"
"USE_LLVM_SHLIB=1"
"USE_SYSTEM_LIBUNWIND=1"
- branch master updated (83fc59b -> 27913a6), guix-commits, 2020/10/16
- 01/10: nls: Update., guix-commits, 2020/10/16
- 04/10: guix-install.sh: Check the service 'nscd' and suggest it., guix-commits, 2020/10/16
- 05/10: .guix-authorizations: Add m1gu3l., guix-commits, 2020/10/16
- 06/10: gnu: julia: Update to 1.5.2.,
guix-commits <=
- 03/10: guix-install.sh: Add symbolic links for supported shell completions., guix-commits, 2020/10/16
- 07/10: gnu: runc, skopeo, docker-cli, umoci: Don't 'chdir' in build phases., guix-commits, 2020/10/16
- 10/10: gnu: gnuzilla: Use 'assume-valid-file-name' where appropriate., guix-commits, 2020/10/16
- 08/10: gexp: Add 'assume-valid-file-name' syntax for use with 'local-file'., guix-commits, 2020/10/16
- 09/10: services: provenance: Wrap config file name in 'assume-valid-file-name'., guix-commits, 2020/10/16
- 02/10: nls: Update manual translations., guix-commits, 2020/10/16