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01/16: gnu: Add r-reactome-db.
From: |
guix-commits |
Subject: |
01/16: gnu: Add r-reactome-db. |
Date: |
Wed, 18 Dec 2019 09:33:41 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 6f15ea24158aac4c265bb0a93d199123dad9c02e
Author: Ricardo Wurmus <address@hidden>
Date: Wed Dec 18 15:23:15 2019 +0100
gnu: Add r-reactome-db.
* gnu/packages/bioconductor.scm (r-reactome-db): New variable.
---
gnu/packages/bioconductor.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 577a43c..b9ee81a 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -47,6 +47,28 @@
;;; Annotations
+(define-public r-reactome-db
+ (package
+ (name "r-reactome-db")
+ (version "1.70.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "reactome.db" version 'annotation))
+ (sha256
+ (base32
+ "05wc4fp0faq6h3kq5rwafnips043as31yq11mrjngfxvf5i10srg"))))
+ (properties `((upstream-name . "reactome.db")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotationdbi" ,r-annotationdbi)))
+ (home-page "https://bioconductor.org/packages/reactome.db/";)
+ (synopsis "Annotation maps for reactome")
+ (description
+ "This package provides a set of annotation maps for the REACTOME
+database, assembled using data from REACTOME.")
+ (license license:cc-by4.0)))
+
(define-public r-bsgenome-celegans-ucsc-ce6
(package
(name "r-bsgenome-celegans-ucsc-ce6")
- branch master updated (7e9d6f0 -> 77e2de3), guix-commits, 2019/12/18
- 01/16: gnu: Add r-reactome-db.,
guix-commits <=
- 02/16: gnu: Add r-curatedtcgadata., guix-commits, 2019/12/18
- 04/16: gnu: Add r-graphite., guix-commits, 2019/12/18
- 05/16: gnu: Add r-reactomepa., guix-commits, 2019/12/18
- 03/16: gnu: Add r-influencer., guix-commits, 2019/12/18
- 06/16: gnu: Add r-ebarrays., guix-commits, 2019/12/18
- 07/16: gnu: Add r-bioccasestudies., guix-commits, 2019/12/18
- 09/16: gnu: Add r-experimenthub., guix-commits, 2019/12/18
- 12/16: gnu: Add r-biocor., guix-commits, 2019/12/18
- 08/16: gnu: Add r-biocgraph., guix-commits, 2019/12/18
- 11/16: gnu: Add r-bioconcotk., guix-commits, 2019/12/18