11/13: gnu: rcas-web: Fix build with RCAS > 1.3.x.

[guix-commits]

nckx pushed a commit to branch master
in repository guix.

commit 5767547e7351c761d40bc0af739fcb787e74c16e
Author: Tobias Geerinckx-Rice <address@hidden>
Date:   Thu Oct 3 15:09:38 2019 +0200

    gnu: rcas-web: Fix build with RCAS > 1.3.x.
    
    * gnu/packages/bioinformatics.scm (rcas-web)[arguments]: Add ‘find-RCAS’ 
phase.
---
 gnu/packages/bioinformatics.scm | 7 +++++++
 1 file changed, 7 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6d36bb7..5ec6005 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8418,6 +8418,13 @@ library implementing most of the pipeline's features.")
     (arguments
      `(#:phases
        (modify-phases %standard-phases
+         (add-before 'configure 'find-RCAS
+           ;; The configure script can't find non-1.3.x versions of RCAS 
because
+           ;; its R expression ‘1.10.1 >= 1.3.4’ evaluates to false.
+           (lambda _
+             (substitute* "configure"
+               (("1\\.3\\.4") "0.0.0"))
+             #t))
          (add-after 'install 'wrap-executable
            (lambda* (#:key inputs outputs #:allow-other-keys)
              (let* ((out (assoc-ref outputs "out"))