[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
01/215: guix: Update to Bioconductor 3.9.
From: |
guix-commits |
Subject: |
01/215: guix: Update to Bioconductor 3.9. |
Date: |
Sun, 5 May 2019 18:15:27 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 6490cd31cc5b7ef6607ec28a05e9cd50793c0c50
Author: Ricardo Wurmus <address@hidden>
Date: Sat May 4 10:26:31 2019 +0200
guix: Update to Bioconductor 3.9.
* guix/build-system/r.scm (bioconductor-uri): Use 3.9 archive URL.
* guix/import/cran.scm (%bioconductor-version): Update to 3.9.
---
guix/build-system/r.scm | 2 +-
guix/import/cran.scm | 4 ++--
2 files changed, 3 insertions(+), 3 deletions(-)
diff --git a/guix/build-system/r.scm b/guix/build-system/r.scm
index 664515d..e721415 100644
--- a/guix/build-system/r.scm
+++ b/guix/build-system/r.scm
@@ -53,7 +53,7 @@ release corresponding to NAME and VERSION."
(list (string-append
"https://bioconductor.org/packages/release/bioc/src/contrib/"
name "_" version ".tar.gz")
;; TODO: use %bioconductor-version from (guix import cran)
- (string-append
"https://bioconductor.org/packages/3.8/bioc/src/contrib/Archive/"
+ (string-append
"https://bioconductor.org/packages/3.9/bioc/src/contrib/Archive/"
name "_" version ".tar.gz")))
(define %r-build-system-modules
diff --git a/guix/import/cran.scm b/guix/import/cran.scm
index b287be6..f08ff61 100644
--- a/guix/import/cran.scm
+++ b/guix/import/cran.scm
@@ -128,9 +128,9 @@ package definition."
(define %cran-url "https://cran.r-project.org/web/packages/")
(define %bioconductor-url "https://bioconductor.org/packages/")
-;; The latest Bioconductor release is 3.8. Bioconductor packages should be
+;; The latest Bioconductor release is 3.9. Bioconductor packages should be
;; updated together.
-(define %bioconductor-version "3.8")
+(define %bioconductor-version "3.9")
(define %bioconductor-packages-list-url
(string-append "https://bioconductor.org/packages/"
- branch master updated (123e424 -> 85c1d20), guix-commits, 2019/05/05
- 02/215: gnu: Add r-base64url., guix-commits, 2019/05/05
- 03/215: gnu: Add r-biocsingular., guix-commits, 2019/05/05
- 12/215: gnu: r-units: Update to 0.6-3., guix-commits, 2019/05/05
- 01/215: guix: Update to Bioconductor 3.9.,
guix-commits <=
- 05/215: gnu: Add r-grimport2., guix-commits, 2019/05/05
- 06/215: gnu: Add r-scrime., guix-commits, 2019/05/05
- 04/215: gnu: Add r-rcpphnsw., guix-commits, 2019/05/05
- 07/215: gnu: Add r-blme., guix-commits, 2019/05/05
- 11/215: gnu: Add r-dqrng., guix-commits, 2019/05/05
- 10/215: gnu: Add r-sitmo., guix-commits, 2019/05/05
- 08/215: gnu: Add r-batchtools., guix-commits, 2019/05/05
- 13/215: gnu: r-rgraphviz: Update to 2.28.0., guix-commits, 2019/05/05
- 26/215: gnu: r-biocstyle: Update to 2.12.0., guix-commits, 2019/05/05
- 15/215: gnu: r-genefilter: Update to 1.66.0., guix-commits, 2019/05/05