08/10: gnu: Add r-progeny.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 5622628fd1a6e849b9ccebc37a944d892acb4c51
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Apr 3 17:07:08 2019 +0200

    gnu: Add r-progeny.
    
    * gnu/packages/bioconductor.scm (r-progeny): New variable.
---
 gnu/packages/bioconductor.scm | 22 ++++++++++++++++++++++
 1 file changed, 22 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 8232823..d033258 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4202,3 +4202,25 @@ This algorithm is based on the publication by Hart et 
al., 2013 (Pubmed ID
 sequencing reads aligner and @code{AdapterRemoval}, a convenient tool for
 rapid adapter trimming, identification, and read merging.")
     (license license:gpl3+)))
+
+(define-public r-progeny
+  (package
+    (name "r-progeny")
+    (version "1.4.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "progeny" version))
+       (sha256
+        (base32
+         "02z09rbzi305jrwzai8zayxi82563lxcaldp4r9pw564qkbl7pk7"))))
+    (build-system r-build-system)
+    (propagated-inputs `(("r-biobase" ,r-biobase)))
+    (home-page "https://github.com/saezlab/progeny";)
+    (synopsis "Pathway responsive gene activity inference")
+    (description
+     "This package provides a function to infer pathway activity from gene
+expression.  It contains the linear model inferred in the publication
+\"Perturbation-response genes reveal signaling footprints in cancer gene
+expression\".")
+    (license license:asl2.0)))