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04/06: gnu: Add r-ldheatmap.
From: |
guix-commits |
Subject: |
04/06: gnu: Add r-ldheatmap. |
Date: |
Mon, 25 Mar 2019 09:00:41 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 1cdd9f0e8a3235cdb4f56f8d0ced569cba852079
Author: Ricardo Wurmus <address@hidden>
Date: Mon Mar 25 13:45:00 2019 +0100
gnu: Add r-ldheatmap.
* gnu/packages/cran.scm (r-ldheatmap): New variable.
---
gnu/packages/cran.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index b6fe539..4d7f68b 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -12579,3 +12579,28 @@ random effects, including spatial effects in field
trials and pedigree
effects. It is applicable to backcrosses, doubled haploids, recombinant
inbred lines, F2 intercrosses, and association mapping populations.")
(license license:gpl2)))
+
+(define-public r-ldheatmap
+ (package
+ (name "r-ldheatmap")
+ (version "0.99-5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "LDheatmap" version))
+ (sha256
+ (base32
+ "0il3g3n3bzv74lz7dlhyiwc2x2417v6yhx2g47pahxdzqa09kf4s"))))
+ (properties `((upstream-name . "LDheatmap")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-genetics" ,r-genetics)
+ ("r-snpstats" ,r-snpstats)))
+ (home-page "http://stat.sfu.ca/statgen/research/ldheatmap.html")
+ (synopsis "Graphical display of pairwise linkage disequilibria between
SNPs")
+ (description
+ "This package provides tools to produce a graphical display, as a heat
+map, of measures of pairwise linkage disequilibria between SNPs. Users may
+optionally include the physical locations or genetic map distances of each SNP
+on the plot.")
+ (license license:gpl3)))
- branch master updated (c3b5c80 -> 7cd4ff2), guix-commits, 2019/03/25
- 02/06: gnu: Add r-ibdreg., guix-commits, 2019/03/25
- 05/06: gnu: Add r-hwde., guix-commits, 2019/03/25
- 06/06: gnu: Add r-tdthap., guix-commits, 2019/03/25
- 04/06: gnu: Add r-ldheatmap.,
guix-commits <=
- 03/06: gnu: Add r-dlmap., guix-commits, 2019/03/25
- 01/06: gnu: Add r-bqtl., guix-commits, 2019/03/25