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01/09: Merge branch 'core-updates' into core-updates-next
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From: |
Jan Nieuwenhuizen |
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Subject: |
01/09: Merge branch 'core-updates' into core-updates-next |
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Date: |
Tue, 23 Oct 2018 17:00:32 -0400 (EDT) |
janneke pushed a commit to branch core-updates-next
in repository guix.
commit cf7658f7cb5de0e17f4801faa84c378a4b40033e
Merge: 09c5a56 ffddb42
Author: Jan Nieuwenhuizen <address@hidden>
Date: Sun Oct 21 23:18:19 2018 +0200
Merge branch 'core-updates' into core-updates-next
.dir-locals.el | 2 +
Makefile.am | 2 +
build-aux/run-system-tests.scm | 49 +-
configure.ac | 6 +-
doc/contributing.texi | 8 +
doc/guix.texi | 424 ++-
etc/guix-install.sh | 3 +
etc/snippets/scheme-mode/guix-origin | 4 +-
gnu/local.mk | 34 +-
gnu/packages/abiword.scm | 6 +-
gnu/packages/admin.scm | 31 +-
gnu/packages/agda.scm | 52 +-
gnu/packages/android.scm | 4 +-
gnu/packages/astronomy.scm | 7 +-
gnu/packages/audio.scm | 82 +-
gnu/packages/augeas.scm | 16 +-
gnu/packages/aux-files/linux-libre/4.18-arm64.conf | 4 +-
gnu/packages/aux-files/linux-libre/4.18-i686.conf | 6 +-
.../aux-files/linux-libre/4.18-x86_64.conf | 6 +-
gnu/packages/backup.scm | 7 +-
gnu/packages/batik.scm | 258 ++
gnu/packages/bioconductor.scm | 27 +
gnu/packages/bioinformatics.scm | 970 +++++--
gnu/packages/bittorrent.scm | 6 +-
gnu/packages/boost.scm | 11 +
gnu/packages/bootloaders.scm | 12 +-
gnu/packages/calendar.scm | 4 +-
gnu/packages/check.scm | 7 +-
gnu/packages/chez.scm | 4 +-
gnu/packages/ci.scm | 6 +-
gnu/packages/code.scm | 13 +-
gnu/packages/compression.scm | 53 +-
gnu/packages/cran.scm | 381 +++
gnu/packages/crypto.scm | 34 +
gnu/packages/cups.scm | 10 +-
gnu/packages/databases.scm | 69 +-
gnu/packages/debian.scm | 7 +-
gnu/packages/dico.scm | 11 +-
gnu/packages/dictionaries.scm | 3 +-
gnu/packages/disk.scm | 105 +-
gnu/packages/dns.scm | 75 +-
gnu/packages/education.scm | 4 +-
gnu/packages/emacs.scm | 413 ++-
gnu/packages/embedded.scm | 39 +
gnu/packages/emulators.scm | 17 +-
gnu/packages/enchant.scm | 58 +-
gnu/packages/engineering.scm | 24 +
gnu/packages/enlightenment.scm | 29 +-
gnu/packages/fabric-management.scm | 24 +-
gnu/packages/fcitx.scm | 2 +-
gnu/packages/file-systems.scm | 4 +-
gnu/packages/fonts.scm | 54 +-
gnu/packages/fontutils.scm | 53 +
gnu/packages/freedesktop.scm | 8 +-
gnu/packages/ftp.scm | 16 +-
gnu/packages/game-development.scm | 21 +-
gnu/packages/games.scm | 192 +-
gnu/packages/gcal.scm | 20 +-
gnu/packages/geo.scm | 230 +-
gnu/packages/gimp.scm | 65 +
gnu/packages/gl.scm | 13 +-
gnu/packages/glib.scm | 4 +-
gnu/packages/gnome.scm | 143 +-
gnu/packages/gnucash.scm | 47 +-
gnu/packages/gnupg.scm | 12 +-
gnu/packages/gnuzilla.scm | 219 +-
gnu/packages/golang.scm | 48 +-
gnu/packages/gprolog.scm | 19 +-
gnu/packages/graph.scm | 1 +
gnu/packages/graphics.scm | 18 +-
gnu/packages/graphviz.scm | 9 +-
gnu/packages/gstreamer.scm | 7 +-
gnu/packages/gtk.scm | 69 +-
gnu/packages/guile.scm | 83 +-
gnu/packages/hardware.scm | 114 +-
gnu/packages/haskell-check.scm | 107 +-
gnu/packages/haskell-crypto.scm | 127 +-
gnu/packages/haskell-web.scm | 170 +-
gnu/packages/haskell.scm | 2903 ++++++++++++++------
gnu/packages/hexedit.scm | 23 +-
gnu/packages/ibus.scm | 37 +-
gnu/packages/icu4c.scm | 6 +
gnu/packages/idris.scm | 62 +-
gnu/packages/image-processing.scm | 8 +-
gnu/packages/image.scm | 12 +-
gnu/packages/imagemagick.scm | 4 +-
gnu/packages/java.scm | 240 +-
gnu/packages/kde.scm | 87 +-
gnu/packages/kodi.scm | 32 +-
gnu/packages/libevent.scm | 13 +
gnu/packages/libreoffice.scm | 7 +-
gnu/packages/license.scm | 4 +-
gnu/packages/linux.scm | 94 +-
gnu/packages/lisp.scm | 2069 +++++++++++++-
gnu/packages/llvm.scm | 10 +-
gnu/packages/lsof.scm | 7 +
gnu/packages/lxde.scm | 4 +-
gnu/packages/machine-learning.scm | 19 +-
gnu/packages/mail.scm | 19 +-
gnu/packages/mate.scm | 2 +-
gnu/packages/maths.scm | 86 +-
gnu/packages/messaging.scm | 31 +-
gnu/packages/mpd.scm | 16 +-
gnu/packages/mpi.scm | 5 +-
gnu/packages/mtools.scm | 5 +-
gnu/packages/music.scm | 98 +-
gnu/packages/nano.scm | 4 +-
gnu/packages/networking.scm | 68 +-
gnu/packages/nickle.scm | 4 +-
gnu/packages/node.scm | 36 +-
gnu/packages/ocaml.scm | 43 +-
gnu/packages/opencl.scm | 8 +-
gnu/packages/openldap.scm | 1 +
gnu/packages/package-management.scm | 74 +-
gnu/packages/parallel.scm | 6 +-
.../bastet-change-source-of-unordered_set.patch | 40 +
.../patches/borg-respect-storage-quota.patch | 32 +
.../patches/clang-3.5-libsanitizer-ustat-fix.patch | 46 +
gnu/packages/patches/clisp-glibc-2.26.patch | 20 -
gnu/packages/patches/crawl-upgrade-saves.patch | 25 +-
.../patches/emacs-exwm-fix-fullscreen-issue.patch | 27 -
.../patches/ghc-haddock-library-unbundle.patch | 86 +
.../patches/gnucash-disable-failing-tests.patch | 39 +
.../patches/gnucash-price-quotes-perl.patch | 5 +-
.../patches/grub-check-error-efibootmgr.patch | 23 +-
.../patches/hmmer-remove-cpu-specificity.patch | 22 -
gnu/packages/patches/icecat-CVE-2018-12383.patch | 103 +
.../icecat-CVE-2018-5157-and-CVE-2018-5158.patch | 441 ---
.../patches/icecat-avoid-bundled-libraries.patch | 34 +-
gnu/packages/patches/icecat-bug-1413868-pt1.patch | 663 -----
.../icecat-use-system-graphite2+harfbuzz.patch | 226 ++
.../patches/icecat-use-system-graphite2.patch | 248 --
.../patches/icecat-use-system-harfbuzz.patch | 279 --
.../patches/icecat-use-system-media-libs.patch | 381 +++
gnu/packages/patches/libgxps-CVE-2017-11590.patch | 48 -
.../patches/libssh-hostname-parser-bug.patch | 22 +-
.../libvpx-use-after-free-in-postproc.patch | 34 +
gnu/packages/patches/python-CVE-2018-14647.patch | 61 +
gnu/packages/patches/python-testtools.patch | 57 +
.../patches/python2-CVE-2018-1000802.patch | 47 +
gnu/packages/patches/python2-CVE-2018-14647.patch | 61 +
...pat-getopt-fix-option-with-nondigit-param.patch | 45 +
.../quilt-compat-getopt-fix-second-separator.patch | 58 +
gnu/packages/patches/quilt-test-fix-regex.patch | 41 +
gnu/packages/patches/rsem-makefile.patch | 682 -----
.../soundconverter-remove-gconf-dependency.patch | 83 +
gnu/packages/patches/swig-guile-gc.patch | 76 +
gnu/packages/patches/x265-arm-asm-primitives.patch | 360 ---
.../patches/x265-detect512-all-arches.patch | 37 +
gnu/packages/patches/x265-fix-ppc64le-build.patch | 25 -
.../patches/zstd-fix-stdin-list-test.patch | 30 -
.../patches/zstd-fix-stdin-list-without-tty.patch | 67 -
gnu/packages/patchutils.scm | 22 +-
gnu/packages/perl.scm | 4 +
gnu/packages/photo.scm | 4 +-
gnu/packages/python-crypto.scm | 6 +-
gnu/packages/python-web.scm | 220 +-
gnu/packages/python.scm | 166 +-
gnu/packages/re2c.scm | 5 +-
gnu/packages/regex.scm | 4 +-
gnu/packages/ruby.scm | 106 +-
gnu/packages/rust.scm | 57 +-
gnu/packages/sdl.scm | 92 +
gnu/packages/skarnet.scm | 4 +-
gnu/packages/ssh.scm | 64 +-
gnu/packages/swig.scm | 2 +
gnu/packages/syncthing.scm | 62 +-
gnu/packages/syndication.scm | 7 +-
gnu/packages/tex.scm | 253 ++
gnu/packages/textutils.scm | 7 +-
gnu/packages/tls.scm | 36 +-
gnu/packages/tmux.scm | 4 +-
gnu/packages/version-control.scm | 81 +-
gnu/packages/video.scm | 102 +-
gnu/packages/vpn.scm | 10 +
gnu/packages/vulkan.scm | 15 +-
gnu/packages/web.scm | 55 +-
gnu/packages/webkit.scm | 49 +-
gnu/packages/wine.scm | 6 +-
gnu/packages/wm.scm | 54 +-
gnu/packages/wxwidgets.scm | 4 +-
gnu/packages/xdisorg.scm | 24 +
gnu/packages/xml.scm | 22 +-
gnu/packages/xorg.scm | 4 +-
gnu/services/admin.scm | 6 +-
gnu/services/base.scm | 32 +-
gnu/services/desktop.scm | 4 +-
gnu/services/herd.scm | 20 +
gnu/services/networking.scm | 118 +-
gnu/services/shepherd.scm | 39 +-
gnu/services/version-control.scm | 180 +-
gnu/services/web.scm | 96 +-
gnu/system.scm | 2 +-
gnu/system/examples/bare-bones.tmpl | 2 +-
gnu/system/examples/beaglebone-black.tmpl | 2 +-
gnu/system/mapped-devices.scm | 5 +-
gnu/system/shadow.scm | 7 +-
gnu/system/vm.scm | 20 +-
gnu/tests/base.scm | 2 +-
gnu/tests/databases.scm | 4 +-
gnu/tests/dict.scm | 2 +-
gnu/tests/mail.scm | 6 +-
gnu/tests/messaging.scm | 4 +-
gnu/tests/monitoring.scm | 2 +-
gnu/tests/networking.scm | 4 +-
gnu/tests/nfs.scm | 2 +-
gnu/tests/rsync.scm | 2 +-
gnu/tests/ssh.scm | 2 +-
gnu/tests/version-control.scm | 118 +-
gnu/tests/virtualization.scm | 2 +-
gnu/tests/web.scm | 52 +-
guix/build-system/glib-or-gtk.scm | 2 +-
guix/build-system/haskell.scm | 32 +-
guix/build-system/python.scm | 2 +-
guix/build/download.scm | 33 +-
guix/build/haskell-build-system.scm | 32 +-
guix/build/java-utils.scm | 10 +-
guix/build/lisp-utils.scm | 7 +-
guix/build/store-copy.scm | 23 +-
guix/channels.scm | 16 +-
guix/gexp.scm | 8 +
guix/git-download.scm | 15 +-
guix/gnupg.scm | 2 +-
guix/import/json.scm | 3 +-
guix/import/pypi.scm | 2 +-
guix/import/stackage.scm | 11 +-
guix/inferior.scm | 366 ++-
guix/profiles.scm | 114 +-
guix/progress.scm | 119 +-
guix/scripts.scm | 4 +-
guix/scripts/build.scm | 22 +-
guix/scripts/describe.scm | 2 +-
guix/scripts/environment.scm | 117 +-
guix/scripts/import/cran.scm | 2 +
guix/scripts/pack.scm | 150 +-
guix/scripts/package.scm | 66 +-
guix/scripts/perform-download.scm | 17 +-
guix/scripts/pull.scm | 155 +-
guix/scripts/substitute.scm | 44 +-
guix/scripts/system.scm | 37 +-
guix/self.scm | 9 +-
guix/serialization.scm | 3 +-
guix/status.scm | 605 ++++
guix/store.scm | 94 +-
guix/store/database.scm | 44 +-
guix/tests.scm | 37 +-
guix/ui.scm | 122 +-
nix/libstore/build.cc | 52 +-
nix/libstore/builtins.cc | 5 +-
nix/libstore/globals.cc | 11 +-
nix/libstore/globals.hh | 21 +-
nix/libstore/worker-protocol.hh | 2 +-
nix/libutil/archive.cc | 31 +-
nix/libutil/archive.hh | 5 -
nix/nix-daemon/nix-daemon.cc | 2 +-
po/guix/POTFILES.in | 2 +
tests/gexp.scm | 4 +
tests/guix-build.sh | 4 +
tests/guix-pack.sh | 30 +-
tests/guix-package.sh | 15 +
tests/guix-system.sh | 4 +-
tests/inferior.scm | 123 +-
tests/pack.scm | 75 +-
tests/pypi.scm | 2 +-
tests/services.scm | 30 +-
tests/status.scm | 183 ++
tests/store.scm | 63 +
267 files changed, 14800 insertions(+), 6500 deletions(-)
diff --cc gnu/local.mk
index 5740127,befe3c4..4ba49e8
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@@ -591,9 -592,9 +592,10 @@@ dist_patch_DATA =
%D%/packages/patches/awesome-reproducible-png.patch \
%D%/packages/patches/azr3.patch \
%D%/packages/patches/bash-completion-directories.patch \
+ %D%/packages/patches/bastet-change-source-of-unordered_set.patch \
%D%/packages/patches/bazaar-CVE-2017-14176.patch \
%D%/packages/patches/beignet-correct-file-names.patch \
+ %D%/packages/patches/binutils-boot-2.20.1a.patch \
%D%/packages/patches/binutils-loongson-workaround.patch \
%D%/packages/patches/blast+-fix-makefile.patch \
%D%/packages/patches/boost-fix-icu-build.patch \
- branch core-updates-next updated (09c5a56 -> d0bb7ed), Jan Nieuwenhuizen, 2018/10/23
- 04/09: bootstrap: Add %mes-stripped, %mes-bootstrap-tarball., Jan Nieuwenhuizen, 2018/10/23
- 03/09: gnu: mes: Update to 0.18.0-08f04f55., Jan Nieuwenhuizen, 2018/10/23
- 02/09: doc: Move `Reduced Binary Seed Bootstrap' into `Bootstrapping'., Jan Nieuwenhuizen, 2018/10/23
- 06/09: bootstrap: Add %bootstrap-mes., Jan Nieuwenhuizen, 2018/10/23
- 09/09: doc: Update Preparing to Use the Bootstrap Binaries., Jan Nieuwenhuizen, 2018/10/23
- 01/09: Merge branch 'core-updates' into core-updates-next,
Jan Nieuwenhuizen <=
- 08/09: bootstrap: Build with %bootstrap-mes., Jan Nieuwenhuizen, 2018/10/23
- 05/09: bootstrap: Move use-modules to top of builder., Jan Nieuwenhuizen, 2018/10/23
- 07/09: gnu: mescc-tools: Update to 0.5.2-0.bb062b0d., Jan Nieuwenhuizen, 2018/10/23