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01/07: Merge branch 'master' into staging


From: Marius Bakke
Subject: 01/07: Merge branch 'master' into staging
Date: Wed, 20 Sep 2017 13:48:32 -0400 (EDT)

mbakke pushed a commit to branch staging
in repository guix.

commit 58366883f2f1516a4a02f5b4e2a70e86481827b5
Merge: f40aef6 9a1c4a9
Author: Marius Bakke <address@hidden>
Date:   Wed Sep 20 18:49:26 2017 +0200

    Merge branch 'master' into staging

 Makefile.am                                        |   4 +
 build-aux/compile-all.scm                          |   3 +-
 configure.ac                                       |   2 +-
 doc/contributing.texi                              |  32 +-
 doc/guix.texi                                      | 179 +++++-
 gnu/bootloader/grub.scm                            |   4 +-
 gnu/build/file-systems.scm                         | 130 +----
 gnu/build/marionette.scm                           |   7 +-
 gnu/build/vm.scm                                   |  53 +-
 gnu/local.mk                                       |  30 +-
 gnu/packages/admin.scm                             |  11 +-
 gnu/packages/audio.scm                             |  16 +-
 gnu/packages/backup.scm                            |   9 +-
 gnu/packages/base.scm                              |  14 +
 gnu/packages/bioinformatics.scm                    |  30 +-
 gnu/packages/bootloaders.scm                       |  69 +++
 gnu/packages/build-tools.scm                       |  23 +-
 gnu/packages/cdrom.scm                             |   4 +-
 gnu/packages/certs.scm                             |   4 +-
 gnu/packages/check.scm                             |  24 +
 gnu/packages/ci.scm                                |  13 +-
 gnu/packages/cobol.scm                             |  59 ++
 gnu/packages/code.scm                              |   8 +-
 gnu/packages/commencement.scm                      |   8 +-
 gnu/packages/compression.scm                       |  18 +-
 gnu/packages/cran.scm                              | 290 +++++++++-
 gnu/packages/crypto.scm                            |  31 ++
 gnu/packages/cups.scm                              | 122 ++++-
 gnu/packages/databases.scm                         |  57 +-
 gnu/packages/disk.scm                              |  21 +
 gnu/packages/django.scm                            |   4 +-
 gnu/packages/ebook.scm                             |  12 +-
 gnu/packages/emacs.scm                             | 188 ++++++-
 gnu/packages/enlightenment.scm                     |  18 +-
 gnu/packages/file.scm                              |  11 +-
 gnu/packages/finance.scm                           | 188 ++++++-
 gnu/packages/freedesktop.scm                       |  73 ++-
 gnu/packages/ftp.scm                               |   4 +-
 gnu/packages/game-development.scm                  | 108 +++-
 gnu/packages/gcc.scm                               | 112 +++-
 gnu/packages/gdb.scm                               |   4 +-
 gnu/packages/gnome.scm                             | 149 +++--
 gnu/packages/gnupg.scm                             |  83 ++-
 gnu/packages/gnuzilla.scm                          |   8 +-
 gnu/packages/graphics.scm                          |  40 +-
 gnu/packages/gstreamer.scm                         |  28 +-
 gnu/packages/gtk.scm                               |  26 +-
 gnu/packages/image-viewers.scm                     |   4 +-
 gnu/packages/image.scm                             |   9 +-
 gnu/packages/imagemagick.scm                       |  11 +-
 gnu/packages/java.scm                              |   4 +
 gnu/packages/libffcall.scm                         |   4 +-
 gnu/packages/libidn.scm                            |  15 +
 gnu/packages/libreoffice.scm                       |  78 +++
 gnu/packages/linux.scm                             |  77 ++-
 gnu/packages/mail.scm                              |  90 +--
 gnu/packages/man.scm                               |   4 +-
 gnu/packages/markup.scm                            |  88 +++
 gnu/packages/mate.scm                              | 604 +++++++++++++++++++++
 gnu/packages/maths.scm                             |  86 +++
 gnu/packages/mes.scm                               |   9 +-
 gnu/packages/mp3.scm                               |   4 +-
 gnu/packages/mpi.scm                               |  23 +-
 gnu/packages/package-management.scm                |   6 +-
 gnu/packages/password-utils.scm                    |  98 ++++
 gnu/packages/patches/bluez-CVE-2017-1000250.patch  |  42 ++
 gnu/packages/patches/calibre-drop-unrar.patch      |  49 --
 gnu/packages/patches/csound-header-ordering.patch  |  20 -
 .../emacs-unsafe-enriched-mode-translations.patch  |  85 +++
 gnu/packages/patches/file-CVE-2017-1000249.patch   |  27 +
 .../patches/foomatic-filters-CVE-2015-8327.patch   |  14 +
 .../patches/foomatic-filters-CVE-2015-8560.patch   |  13 +
 ...phicsmagick-CVE-2017-11403+CVE-2017-14103.patch | 137 +++++
 .../patches/graphicsmagick-CVE-2017-14042.patch    |  80 +++
 .../patches/graphicsmagick-CVE-2017-14165.patch    |  72 +++
 gnu/packages/patches/httpd-CVE-2017-9798.patch     |  22 +
 .../patches/libarchive-CVE-2017-14166.patch        |  45 ++
 gnu/packages/patches/libzip-CVE-2017-12858.patch   |  45 --
 gnu/packages/patches/meson-for-build-rpath.patch   |  24 +
 .../patches/newsbeuter-CVE-2017-14500.patch        |  43 ++
 gnu/packages/patches/openfoam-4.1-cleanup.patch    | 243 +++++++++
 gnu/packages/patches/openjpeg-CVE-2017-14151.patch |  46 ++
 gnu/packages/patches/openjpeg-CVE-2017-14152.patch |  38 ++
 gnu/packages/patches/openjpeg-CVE-2017-14164.patch |  89 +++
 ...ext-markdown-discount-use-system-markdown.patch |  32 ++
 .../python-acme-dont-use-openssl-rand.patch        |  28 +
 gnu/packages/patches/qemu-CVE-2017-13711.patch     |  89 +++
 gnu/packages/patches/qemu-CVE-2017-14167.patch     |  69 +++
 .../patches/ruby-2.2.7-rubygems-2613-ruby22.patch  | 355 ------------
 .../patches/ruby-2.3.4-rubygems-2613-ruby23.patch  | 355 ------------
 .../patches/ruby-rubygems-2612-ruby24.patch        | 437 ---------------
 .../patches/ruby-rubygems-2613-ruby24.patch        | 355 ------------
 gnu/packages/perl.scm                              | 494 +++++++++++++++++
 gnu/packages/photo.scm                             |   4 +-
 gnu/packages/python.scm                            | 227 +++++---
 gnu/packages/ruby.scm                              |  31 +-
 gnu/packages/samba.scm                             |   4 +-
 gnu/packages/simulation.scm                        | 212 ++++++++
 gnu/packages/statistics.scm                        |  57 +-
 gnu/packages/sync.scm                              |   4 +-
 gnu/packages/syndication.scm                       |   5 +-
 gnu/packages/terminals.scm                         |   2 +-
 gnu/packages/texinfo.scm                           |  16 +-
 gnu/packages/time.scm                              |  59 +-
 gnu/packages/tls.scm                               |  14 +-
 gnu/packages/tor.scm                               |   4 +-
 gnu/packages/version-control.scm                   |  36 ++
 gnu/packages/video.scm                             |  19 +-
 gnu/packages/virtualization.scm                    |  23 +-
 gnu/packages/web-browsers.scm                      |   4 +-
 gnu/packages/web.scm                               | 135 ++++-
 gnu/packages/webkit.scm                            |  17 +-
 gnu/packages/xml.scm                               |   8 +-
 gnu/packages/xorg.scm                              |  31 +-
 gnu/services.scm                                   |  37 +-
 gnu/services/base.scm                              | 100 +++-
 gnu/services/cuirass.scm                           |   2 +-
 gnu/services/desktop.scm                           |   3 +-
 gnu/services/networking.scm                        |  55 +-
 gnu/services/web.scm                               |   8 +-
 gnu/services/xorg.scm                              |   1 +
 gnu/system.scm                                     |  72 ++-
 gnu/system/examples/bare-bones.tmpl                |   4 +-
 gnu/system/file-systems.scm                        |  26 +-
 gnu/system/install.scm                             |  17 +-
 gnu/system/mapped-devices.scm                      |   7 +-
 gnu/system/uuid.scm                                | 265 +++++++++
 gnu/system/vm.scm                                  |  79 ++-
 gnu/tests/base.scm                                 |  15 +-
 gnu/tests/desktop.scm                              | 105 ++++
 gnu/tests/install.scm                              | 110 +++-
 guix/build-system/meson.scm                        | 178 ++++++
 guix/build/download.scm                            | 179 +++---
 guix/build/meson-build-system.scm                  | 150 +++++
 guix/cve.scm                                       |  17 +-
 guix/download.scm                                  |   4 +-
 guix/gnu-maintenance.scm                           |  36 +-
 guix/http-client.scm                               |  44 +-
 guix/import/cpan.scm                               |   2 +-
 guix/scripts/download.scm                          |   2 +-
 guix/scripts/lint.scm                              |   7 +-
 guix/scripts/package.scm                           |  21 +-
 guix/scripts/size.scm                              |   2 +-
 guix/scripts/substitute.scm                        | 207 ++++---
 guix/scripts/system.scm                            |  19 +-
 guix/scripts/system/search.scm                     | 144 +++++
 guix/store.scm                                     |   6 +-
 guix/ui.scm                                        |  44 ++
 guix/utils.scm                                     |  36 +-
 po/guix/POTFILES.in                                |   1 +
 po/packages/POTFILES.in                            |   2 +
 tests/cpan.scm                                     |   2 +-
 tests/file-systems.scm                             |  26 -
 tests/guix-system.sh                               |   6 +-
 tests/substitute.scm                               | 193 ++++++-
 tests/uuid.scm                                     |  56 ++
 156 files changed, 7450 insertions(+), 2645 deletions(-)

diff --cc gnu/packages/gtk.scm
index 9de7c5b,d7c18f9..0d3da63
--- a/gnu/packages/gtk.scm
+++ b/gnu/packages/gtk.scm
@@@ -427,7 -427,8 +427,8 @@@ highlighting and other features typica
  (define-public gdk-pixbuf
    (package
     (name "gdk-pixbuf")
 +   (version "2.36.9")
+    (replacement gdk-pixbuf-2.36.10)
 -   (version "2.36.6")
     (source (origin
              (method url-fetch)
              (uri (string-append "mirror://gnome/sources/" name "/"
diff --cc gnu/packages/linux.scm
index 01e895f,8a69f0d..4be6f5e
--- a/gnu/packages/linux.scm
+++ b/gnu/packages/linux.scm
@@@ -3021,7 -3022,8 +3022,8 @@@ Bluetooth audio output devices like hea
  (define-public bluez
    (package
      (name "bluez")
 -    (version "5.45")
 +    (version "5.46")
+     (replacement bluez/fixed)
      (source (origin
                (method url-fetch)
                (uri (string-append
@@@ -3083,6 -3085,20 +3085,20 @@@
  is flexible, efficient and uses a modular implementation.")
      (license license:gpl2+)))
  
+ (define bluez/fixed
+   (package
+     (inherit bluez)
 -    (version "5.45")
++    (version "5.46")
+     (source (origin
+               (method url-fetch)
+               (uri (string-append
+                     "mirror://kernel.org/linux/bluetooth/bluez-"
+                     version ".tar.xz"))
+               (sha256
+                (base32
 -                "1sb4aflgyrl7apricjipa8wx95qm69yja0lmn2f19g560c3v1b2c"))
++                "0a4fj343bdqsfyv12hmj9nym0ilsf0bvm54a4apbiby16ww3vayx"))
+               (patches (search-patches "bluez-CVE-2017-1000250.patch"))))))
+ 
  (define-public fuse-exfat
    (package
      (name "fuse-exfat")



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