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02/11: gnu: htslib: Update to 1.4.1.
From: |
Ben Woodcroft |
Subject: |
02/11: gnu: htslib: Update to 1.4.1. |
Date: |
Sat, 22 Jul 2017 20:31:59 -0400 (EDT) |
benwoodcroft pushed a commit to branch master
in repository guix.
commit a9e4a1e641c3d24ce2aab65546dcac1fd9c37e47
Author: Ben Woodcroft <address@hidden>
Date: Thu Apr 6 22:57:31 2017 +1000
gnu: htslib: Update to 1.4.1.
* gnu/packages/bioinformatics.scm (htslib): Update to 1.4.1.
[inputs]: Add curl, openssl.
---
gnu/packages/bioinformatics.scm | 8 +++++---
1 file changed, 5 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 7669b4c..97a58a5 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3051,7 +3051,7 @@ manipulating HTS data.")
(define-public htslib
(package
(name "htslib")
- (version "1.3.1")
+ (version "1.4.1")
(source (origin
(method url-fetch)
(uri (string-append
@@ -3059,7 +3059,7 @@ manipulating HTS data.")
version "/htslib-" version ".tar.bz2"))
(sha256
(base32
- "1rja282fwdc25ql6izkhdyh8ppw8x2fs0w0js78zgkmqjlikmma9"))))
+ "1crkk79kgxcmrkmh5f58c4k93w4rz6lp97sfsq3s6556zxcxvll5"))))
(build-system gnu-build-system)
(arguments
`(#:phases
@@ -3071,7 +3071,9 @@ manipulating HTS data.")
(("/bin/bash") (which "bash")))
#t)))))
(inputs
- `(("zlib" ,zlib)))
+ `(("openssl" ,openssl)
+ ("curl" ,curl)
+ ("zlib" ,zlib)))
(native-inputs
`(("perl" ,perl)))
(home-page "http://www.htslib.org")
- branch master updated (c62d1a6 -> f3f68a4), Ben Woodcroft, 2017/07/22
- 03/11: gnu: samtools: Update to 1.4.1., Ben Woodcroft, 2017/07/22
- 06/11: gnu: python-pysam: Update to 0.11.2.2., Ben Woodcroft, 2017/07/22
- 01/11: gnu: samtools: Use "modify-phases" syntax., Ben Woodcroft, 2017/07/22
- 02/11: gnu: htslib: Update to 1.4.1.,
Ben Woodcroft <=
- 05/11: gnu: bamm: Use htslib-1.3., Ben Woodcroft, 2017/07/22
- 07/11: gnu: htslib: Update to 1.5., Ben Woodcroft, 2017/07/22
- 09/11: gnu: bcftools: Update to 1.5., Ben Woodcroft, 2017/07/22
- 04/11: gnu: bcftools: Update to 1.4.1., Ben Woodcroft, 2017/07/22
- 08/11: gnu: samtools: Update to 1.5., Ben Woodcroft, 2017/07/22
- 11/11: gnu: metabat: Update to 2.11.1., Ben Woodcroft, 2017/07/22
- 10/11: gnu: python-plastid: Update to 0.4.8., Ben Woodcroft, 2017/07/22