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95/103: gnu: python2-pbcore: Fix inputs:
From: |
Hartmut Goebel |
Subject: |
95/103: gnu: python2-pbcore: Fix inputs: |
Date: |
Tue, 25 Oct 2016 18:00:44 +0000 (UTC) |
htgoebel pushed a commit to branch wip-python-build-system
in repository guix.
commit 03a042d4f5958806a474d283b1ac8ac1b7fbee18
Author: Hartmut Goebel <address@hidden>
Date: Sun Oct 23 21:20:46 2016 +0200
gnu: python2-pbcore: Fix inputs:
* gnu/packages/bioinformatics.scm (python2-pbcore) [inputs] change to
[propagated-inputs]. [native-inputs]: Remove python-docutils, which
comes with sphinx. [former propagated-inputs]: move all (which is only
pyxb) to [inputs].
---
gnu/packages/bioinformatics.scm | 10 ++++------
1 file changed, 4 insertions(+), 6 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4ff8200..09ab423 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3467,17 +3467,15 @@ interrupted by stop codons. OrfM finds and prints
these ORFs.")
"1kjmv891d6qbpp4shhhvkl02ff4q5xlpnls2513sm2cjcrs52f1i"))))
(build-system python-build-system)
(arguments `(#:python ,python-2)) ; pbcore requires Python 2.7
- (inputs
+ (propagated-inputs
`(("python-cython" ,python2-cython)
("python-numpy" ,python2-numpy)
("python-pysam" ,python2-pysam)
("python-h5py" ,python2-h5py)))
(native-inputs
- `(("python-docutils" ,python2-docutils)
- ("python-nose" ,python2-nose)
- ("python-sphinx" ,python2-sphinx)))
- (propagated-inputs
- `(("python-pyxb" ,python2-pyxb)))
+ `(("python-nose" ,python2-nose)
+ ("python-sphinx" ,python2-sphinx)
+ ("python-pyxb" ,python2-pyxb)))
(home-page "http://pacificbiosciences.github.io/pbcore/")
(synopsis "Library for reading and writing PacBio data files")
(description
- 83/103: gnu: python-sphinx-repoze-autointerface: Remove needless input., (continued)
- 83/103: gnu: python-sphinx-repoze-autointerface: Remove needless input., Hartmut Goebel, 2016/10/25
- 71/103: gnu: Add python-rst.linker, python2-rst.linker., Hartmut Goebel, 2016/10/25
- 33/103: gnu: python-fixture: Correct inputs., Hartmut Goebel, 2016/10/25
- 84/103: gnu: python-sphinxcontrib-programoutput: Remove needless input., Hartmut Goebel, 2016/10/25
- 66/103: gnu: python-scikit-image: Correct inputs., Hartmut Goebel, 2016/10/25
- 92/103: gnu: python-testlib: Remove useless self-defined phase "unpack"., Hartmut Goebel, 2016/10/25
- 90/103: gnu: python-nautilus: Correct inputs, Hartmut Goebel, 2016/10/25
- 79/103: gnu: python-urllib3: update comment., Hartmut Goebel, 2016/10/25
- 78/103: gnu: python-wsgi-intercept: Correct inputs., Hartmut Goebel, 2016/10/25
- 101/103: Add a series of FIXME and TODO comments., Hartmut Goebel, 2016/10/25
- 95/103: gnu: python2-pbcore: Fix inputs:,
Hartmut Goebel <=
- 100/103: gnu: python-scikit-learn: Remove useless property "python2-variant"., Hartmut Goebel, 2016/10/25
- 46/103: gnu: python-scipy: Fix build., Hartmut Goebel, 2016/10/25
- 87/103: gnu: python-prompt-toolkit: Correct inputs, Hartmut Goebel, 2016/10/25
- 86/103: gnu: python-pika: Correct input., Hartmut Goebel, 2016/10/25
- 96/103: gnu: python-pytest-django: Remove needless propagated input "python-py"., Hartmut Goebel, 2016/10/25