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95/103: gnu: python2-pbcore: Fix inputs:
From: |
Hartmut Goebel |
Subject: |
95/103: gnu: python2-pbcore: Fix inputs: |
Date: |
Tue, 25 Oct 2016 17:47:57 +0000 (UTC) |
htgoebel pushed a commit to branch wip-python-build-system
in repository guix.
commit 339f3e7b86e408487b44ad064ccea82e304a3c6c
Author: Hartmut Goebel <address@hidden>
Date: Sun Oct 23 21:20:46 2016 +0200
gnu: python2-pbcore: Fix inputs:
* gnu/packages/bioinformatics.scm (python2-pbcore) [inputs] change to
[propagated-inputs]. [native-inputs]: Remove python-docutils, which
comes with sphinx. [former propagated-inputs]: move all (which is only
pyxb) to [inputs].
---
gnu/packages/bioinformatics.scm | 10 ++++------
1 file changed, 4 insertions(+), 6 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4ff8200..09ab423 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3467,17 +3467,15 @@ interrupted by stop codons. OrfM finds and prints
these ORFs.")
"1kjmv891d6qbpp4shhhvkl02ff4q5xlpnls2513sm2cjcrs52f1i"))))
(build-system python-build-system)
(arguments `(#:python ,python-2)) ; pbcore requires Python 2.7
- (inputs
+ (propagated-inputs
`(("python-cython" ,python2-cython)
("python-numpy" ,python2-numpy)
("python-pysam" ,python2-pysam)
("python-h5py" ,python2-h5py)))
(native-inputs
- `(("python-docutils" ,python2-docutils)
- ("python-nose" ,python2-nose)
- ("python-sphinx" ,python2-sphinx)))
- (propagated-inputs
- `(("python-pyxb" ,python2-pyxb)))
+ `(("python-nose" ,python2-nose)
+ ("python-sphinx" ,python2-sphinx)
+ ("python-pyxb" ,python2-pyxb)))
(home-page "http://pacificbiosciences.github.io/pbcore/")
(synopsis "Library for reading and writing PacBio data files")
(description
- 64/103: gnu: python-feedgenerator: Remove python byte-code files from source., (continued)
- 64/103: gnu: python-feedgenerator: Remove python byte-code files from source., Hartmut Goebel, 2016/10/25
- 52/103: gnu: python-scripttest: Correct inputs., Hartmut Goebel, 2016/10/25
- 55/103: gnu: python-setuptools: remove pre-built binaries from source., Hartmut Goebel, 2016/10/25
- 60/103: gnu: python-pyjwt: Add missing inputs and enable test-suite., Hartmut Goebel, 2016/10/25
- 62/103: gnu: python-joblib: Remove python byte-code files from source., Hartmut Goebel, 2016/10/25
- 19/103: gnu: Fix python inputs, part 1: all inputs become propagated-inputs., Hartmut Goebel, 2016/10/25
- 74/103: gnu: python-zope-location: Correct inputs., Hartmut Goebel, 2016/10/25
- 82/103: gnu: python-celery: Remove needless inputs., Hartmut Goebel, 2016/10/25
- 89/103: gnu: python-freezegun: Correct input., Hartmut Goebel, 2016/10/25
- 94/103: gnu: python2-warpedlmm: Remove phase remove-bin-directory., Hartmut Goebel, 2016/10/25
- 95/103: gnu: python2-pbcore: Fix inputs:,
Hartmut Goebel <=
- 45/103: gnu: python-matplotlib: Fix build., Hartmut Goebel, 2016/10/25
- 57/103: gnu: pytest-mock: remove needless propagated input "python-py"., Hartmut Goebel, 2016/10/25
- 65/103: gnu: python-blinker: No longer disable tests., Hartmut Goebel, 2016/10/25
- 79/103: gnu: python-urllib3: update comment., Hartmut Goebel, 2016/10/25
- 47/103: gnu: python-ipython: Fix build., Hartmut Goebel, 2016/10/25
- 54/103: gnu: python-pytest-xdist: Remove needless input python-apipkg., Hartmut Goebel, 2016/10/25
- 53/103: gnu: python-subunit, python-testrepository: Fix inputs, Hartmut Goebel, 2016/10/25
- 67/103: gnu: python2-scikit-image: Remove needless propagated-input., Hartmut Goebel, 2016/10/25
- 66/103: gnu: python-scikit-image: Correct inputs., Hartmut Goebel, 2016/10/25
- 71/103: gnu: Add python-rst.linker, python2-rst.linker., Hartmut Goebel, 2016/10/25