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19/25: gnu: Add r-gseabase.
From: |
Ricardo Wurmus |
Subject: |
19/25: gnu: Add r-gseabase. |
Date: |
Mon, 26 Sep 2016 05:48:18 +0000 (UTC) |
rekado pushed a commit to branch master
in repository guix.
commit ad740ff818b834dc58bd37584f786bac7ef52d2e
Author: Ricardo Wurmus <address@hidden>
Date: Wed Sep 21 22:45:35 2016 +0200
gnu: Add r-gseabase.
* gnu/packages/bioinformatics.scm (r-gseabase): New variable.
---
gnu/packages/bioinformatics.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 0456cc6..2cbda0c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5220,6 +5220,33 @@ databases. Packages produced are intended to be used
with AnnotationDbi.")
the graph algorithms contained in the Boost library.")
(license license:artistic2.0)))
+(define-public r-gseabase
+ (package
+ (name "r-gseabase")
+ (version "1.34.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "GSEABase" version))
+ (sha256
+ (base32
+ "1mvgja8malrnbzfakzjl5mmi7g080kj8zgxwc5964hcmn33i937j"))))
+ (properties `((upstream-name . "GSEABase")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotate" ,r-annotate)
+ ("r-annotationdbi" ,r-annotationdbi)
+ ("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-graph" ,r-graph)
+ ("r-xml" ,r-xml)))
+ (home-page "http://bioconductor.org/packages/GSEABase")
+ (synopsis "Gene set enrichment data structures and methods")
+ (description
+ "This package provides classes and methods to support @dfn{Gene Set
+Enrichment Analysis} (GSEA).")
+ (license license:artistic2.0)))
+
(define-public vsearch
(package
(name "vsearch")
- 12/25: gnu: Add r-backports., (continued)
- 12/25: gnu: Add r-backports., Ricardo Wurmus, 2016/09/26
- 21/25: gnu: Add r-gostats., Ricardo Wurmus, 2016/09/26
- 17/25: gnu: Add r-annotationforge., Ricardo Wurmus, 2016/09/26
- 16/25: gnu: Add r-batchjobs., Ricardo Wurmus, 2016/09/26
- 24/25: gnu: Add r-grohmm., Ricardo Wurmus, 2016/09/26
- 22/25: gnu: Add r-shortread., Ricardo Wurmus, 2016/09/26
- 25/25: gnu: Add r-txdb-hsapiens-ucsc-hg19-knowngene., Ricardo Wurmus, 2016/09/26
- 03/25: gnu: Add r-rpart., Ricardo Wurmus, 2016/09/26
- 14/25: gnu: Add r-bbmisc., Ricardo Wurmus, 2016/09/26
- 13/25: gnu: Add r-checkmate., Ricardo Wurmus, 2016/09/26
- 19/25: gnu: Add r-gseabase.,
Ricardo Wurmus <=
- 20/25: gnu: Add r-category., Ricardo Wurmus, 2016/09/26